SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene160390

Length: 425 nt

UniGene Fasta

>sp_v3.0_unigene160390
AGAAAATTGAACGCAGTGAAGGGCTATGCGGTGGTTATAATGATGGATACAGAGGGGAGCGAGACTTATATGGGGGATCTGAGAGGTGCTGCCTCAGTTAAAGCCGAGGGAGGAGATCCGGCAATATATCTCATGAAATACAGATCACTAAGAAGTTGCCGCAGCAGTGGGCCACTTGTAAACTGTCGTGGAGAGGAGAAAAAATACACTGACAGCGTAAGAGAAACAAGTCATTGTGAACAGAAAATGTCGGCTTGCTGGTTCGCTGCAGTAGTTGGATCTATCTACATTATAAATGAAGTCGGGATGTTTTTGCTGTGCACAGTGATTTCAACGATGAGAGATTTTCCACGTCACTTTGTTTTATGAGATGATCCCACATGCATAAGTGGCTATGAACTCTGGAAAGAATATATATAATGACA

Ace file of the UniGene sp_v3.0_unigene160390

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pyruvate kinase n=3 Tax=Physcomitrella patens subsp. patens RepID=A9TV72_PHYPA	-	-	5.0e-08	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Sma3	Pyruvate kinase isozyme A, chloroplastic	-	-	2.351e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:2.7.1.4-	-	2.384e-10	-

Source	Gene names
Sma3	POPTRDRAFT_832826; RCOM_0910580;

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	pyruvate kinase activity	GO:0004743	Molecular Function	-
Sma3	potassium ion binding	GO:0030955	Molecular Function	-
Sma3	glycolysis	GO:0006096	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyruvate kinase	IPR001697	-	-
Sma3	Pyruvate kinase, barrel	IPR015793	-	-
Sma3	Pyruvate kinase, alpha/beta	IPR015794	-	-
Sma3	Pyruvate/Phosphoenolpyruvate kinase	IPR015813	-	-
Sma3	Pyruvate kinase, active site	IPR018209	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NR11

Fln msg: your sequence is shorter than subject: 123 - 206

Fln protein: RKLNAVKGYAVVIMMDTEGSETYMGDLRGAASVKAEGGDPAIYLMKYRSLRSCRSSGPLVNCRGEEKKYTDSVRETSHCEQKMSACWFAAVVGSIYIINEVGMFLLCTVISTMRDFPRHFVL*

Protein Length: 124

Fln nts: AGAAAATTGAACGCAGTGAAGGGCTATGCGGTGGTTATAATGATGGATACAGAGGGGAGCGAGACTTATATGGGGGATCTGAGAGGTGCTGCCTCAGTTAAAGCCGAGGGAGGAGATCCGGCAATATATCTCATGAAATACAGATCACTAAGAAGTTGCCGCAGCAGTGGGCCACTTGTAAACTGTCGTGGAGAGGAGAAAAAATACACTGACAGCGTAAGAGAAACAAGTCATTGTGAACAGAAAATGTCGGCTTGCTGGTTCGCTGCAGTAGTTGGATCTATCTACATTATAAATGAAGTCGGGATGTTTTTGCTGTGCACAGTGATTTCAACGATGAGAGATTTTCCACGTCACTTTGTTTTATGA___GATGATCCCACATGCATAAGTGGCTATGAACTCTGGAAAGAATATATATAATGACA

Fln Alignment:

HA8LWWM01AZRPA___RKLNAVKGYAVVIMMDTEGSETYMGDLRGAASVKAE
A9NR11________________RKLNEVKGYAVVIMMETEGSETYMGDLGGAASAKAE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain