SustainPineDB

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Assembly info
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SNPs
SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene159761

Length: 95 nt

UniGene Fasta

>sp_v3.0_unigene159761
ACAGAGATTGTTGGCATCTCTCGATCTCAAGTGCAAGTTGGTTGATTTTGGCAATGCGTGCTGGACCTACAAGCAGTTCACGAGTGATATTCAAA

Ace file of the UniGene sp_v3.0_unigene159761

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	90%
Sma3	SRPK4	-	-	8.439e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	Dual-specificity kinase.	EC:2.7.12.1	-	8.854e-07	-

Source	Gene names
Sma3	At3g44850; At5g22840; F28D10_40; F8J2_200; GSVIVT00021715001; LOC_Os03g53720; MtrDRAFT_AC139525g30v2; Os03g0748400; OsI_13507; OsJ_12569; PHYPADRAFT_22627; POPTRDRAFT_1109471; POPTRDRAFT_556921; POPTRDRAFT_782432; RCOM_0840470; RCOM_1185500; VITISV_012217

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G22840.1	Protein kinase superfamily protein chr5:7631103-7633103 REVERSE LENGTH=538	2.0e-13	87%
RefSeq	Arabidopsis thaliana	NP_197675.1	protein kinase family protein [Arabidopsis thaliana]	3.0e-13	87%
RefSeq	Populus trichocarpa	XP_002326404.1	predicted protein [Populus trichocarpa]	6.0e-14	90%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: I1L960

Fln msg: Distance to subject end: 83 aas, your sequence is shorter than subject: 31 - 422

Fln protein: QRLLASLDLKCKLVDFGNACWTYKQFTSDIQ

Protein Length: 32

Fln nts: ACAGAGATTGTTGGCATCTCTCGATCTCAAGTGCAAGTTGGTTGATTTTGGCAATGCGTGCTGGACCTACAAGCAGTTCACGAGTGATATTCAAA

Fln Alignment:

HA8LWWM01AMO78___QRLLASLDLKCKLVDFGNACWTYKQFTSDIQ
I1L960________________QKLLASVDLKCKLVDFGNACWTYKQFTNDIQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain