SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene159302

Length: 159 nt

UniGene Fasta

>sp_v3.0_unigene159302
CAAAGGTATTAAAATGACCGATTACAAAGTCAGTAATTTCAAGTTAGCTCAGGAAGCTACGGTTCTGGTGCATTTGGAGAGATTTATCAAGGAATCAACCCTAAAACCAACCAAGAAGTCGCCATAAAATTTGAAAGTGTGAATACTAAACATCCCCAA

Ace file of the UniGene sp_v3.0_unigene159302

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative protein kinase ADK1 [Oryza sativa Japonica Group]	-	-	3.0e-06	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR36

Fln msg: Distance to subject end: 431 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 41 - 479

Fln protein: FQVSSGSYGSGAFGEIYQGINPKTNQEVAIKFESVNTKHPQ

Protein Length: 42

Fln nts: CAAAGGTATTAAAATGACCGATTACAAAGTCAGTAATTTCAAGTTAGCTCAGGAAGCTACGGTTCTGGTGCATTTGGAGAGATTTATCAAGGAATCAACCCTAAAACCAACCAAGAAGTCGCCATAAAATTTGAAAGTGTGAATACTAAACATCCCCAA

Fln Alignment:

HLKU4M004JN1HN___GSGAFGEIYQGINPKTNQEVAIKFESVNTKHPQ
B8LR36________________GSGSFGEIYLGTNVQTNEEVAIKLESVRTKHPQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain