SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene159233

Length: 306 nt

UniGene Fasta

>sp_v3.0_unigene159233
CCTTCTTCGACTATATCCGTGGAGGTGAGCAGCTCAACTTCATGTGTGCTGTTGATTTCACAGGATCAAATGGTATCCCAACTTCTCCATCCTCTCTGCACGCTCTTAAAACCGGAGGTCTCAATCAATATCAGCAAGCTTTACTGTCAATCGGAGAGATCGTTTTAGAACTATGACTACGATAAGATGGTACCAATGTTCGGATTTGGAGGCAAGCCTAAGTTCCCTAACTTCACTGCAGACAAGGTATTGCACTGTTTCCCATTAACAGGAAATCCTACTGTTGCTGAAGTTCCTGGAATTCAA

Ace file of the UniGene sp_v3.0_unigene159233

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Copine family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CCA07	-	-	4.0e-21	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G08860.1	BON3 Calcium-dependent phospholipid-binding Copine family protein chr1:2842153-2846138 FORWARD LENGTH=584	3.0e-14	58%
RefSeq	Arabidopsis thaliana	NP_172362.3	protein BONZAI 3 [Arabidopsis thaliana]	3.0e-14	58%
RefSeq	Populus trichocarpa	XP_002321753.1	predicted protein [Populus trichocarpa]	2.0e-13	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLG3

Fln msg: Separated hits, possible frame ERROR between 164 and 247, Distance to subject end: 149 aas, your sequence is shorter than subject: 102 - 585

Fln protein: FFDYIRGGEQLNFMCAVDFTGSNGIPTSPSSLHALKTGGLNQYQQALLSIGEIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVLHCFPLTGNPTVAEVPGIQ

Protein Length: 103

Fln nts: CCTTCTTCGACTATATCCGTGGAGGTGAGCAGCTCAACTTCATGTGTGCTGTTGATTTCACAGGATCAAATGGTATCCCAACTTCTCCATCCTCTCTGCACGCTCTTAAAACCGGAGGTCTCAATCAATATCAGCAAGCTTTACTGTCAATCGGAGAGATCGTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGTATTGCACTGTTTCCCATTAACAGGAAATCCTACTGTTGCTGAAGTTCCTGGAATTCAA

Fln Alignment:

HLKU4M004H5AUM___FFDYIRGGEQLNFMCAVDFTGSNGIPTSPSSLHAL-KTGGLNQYQQALLSIGEIVxxxxxxxxxxxxxxxxxxxxxxxxxxxxVLHCFPLTGNPTVAEVPGI
B8LLG3________________FLDYIANGYELNFMVAIDFTASNGNPRLPDSLHYMDPSGRSNAYQRAIWSVGEVLxxxxxxxxxxxxxxxxxxxxxxxxxxxxVSHCFNLNGSGSYAEVEGI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain