SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158634

Length: 320 nt

UniGene Fasta

>sp_v3.0_unigene158634
GCTCTCGACCCGAGCAATGCTGCGCATCCGCGCCTCTGCCTCTGTTGCTTCGAGAGCCATCCCAGCTTCGCAGTTCCGATCATACGCAACTCCTGCTGCTCCCGATTCGAAGCCCCCAGTCGCCCTTTACGGTCTTGATGGAACCTATGCTTCAGCTCTGTATACAGCCGCCGTGAAGAATTCGACTCTCGAGAGCACCGCAAAGGCGATCAATGCGCTGAACGAAGTGTACCACAAGGATGCCAAGCTGGCTGTGATCATGCAAGCACCAACCTTGAGCGCCGAAGACAAGTCTGCAATCATCGCCGAACTGCAGAAGC

Ace file of the UniGene sp_v3.0_unigene158634

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP synthase subunit 5 n=2 Tax=Metarhizium RepID=E9DZ56_METAQ	-	-	5.0e-22	65%
FL-Next	sp=ATP synthase subunit O, mitochondrial; Ipomoea batatas (Sweet potato) (Convolvulus batatas).	-	-	0.0	36%

Source	GOs	Term	Type	Identity
Sma3	proton-transporting ATP synthase complex, catalytic core F(1)	GO:0045261	Cellular Component	-
Sma3	hydrogen ion transporting ATP synthase activity, rotational mechanism	GO:0046933	Molecular Function	-
Sma3	proton-transporting ATPase activity, rotational mechanism	GO:0046961	Molecular Function	-
Sma3	ATP synthesis coupled proton transport	GO:0015986	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	ATPase, F1 complex, OSCP/delta subunit	IPR000711	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: P22778

Fln msg: Distance to subject end: 118 aas, your sequence is shorter than subject: 106 - 244

Fln protein: LSTRAMLRIRASASVASRAIPASQFRSYATPAAPDSKPPVALYGLDGTYASALYTAAVKNSTLESTAKAINALNEVYHKDAKLAVIMQAPTLSAEDKSAIIAELQK

Protein Length: 107

Fln nts: GCTCTCGACCCGAGCAATGCTGCGCATCCGCGCCTCTGCCTCTGTTGCTTCGAGAGCCATCCCAGCTTCGCAGTTCCGATCATACGCAACTCCTGCTGCTCCCGATTCGAAGCCCCCAGTCGCCCTTTACGGTCTTGATGGAACCTATGCTTCAGCTCTGTATACAGCCGCCGTGAAGAATTCGACTCTCGAGAGCACCGCAAAGGCGATCAATGCGCTGAACGAAGTGTACCACAAGGATGCCAAGCTGGCTGTGATCATGCAAGCACCAACCTTGAGCGCCGAAGACAAGTCTGCAATCATCGCCGAACTGCAGAAGC

Fln Alignment:

HLKU4M004IEFO3___RSYATPAAPDS---KPPVALYGLDGTYASALYTAAVKNSTLESTAKAINALNEVYHKDAKLAVIMQAPTLSAEDKSAIIAEL
P22778________________RNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIKEI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain