SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158611

Length: 328 nt

UniGene Fasta

>sp_v3.0_unigene158611
AAACGAACTTCAGTACTTTGAAAGCTCTTCTCAAATTATCCCAAAGCTATTCCTTGGAAATGCTAAAGCATCATATGACTATAAGATGCTGAAACAGCGCAACATCACACATATTCTCACTGTGGCAAATTCGATCATACCAAAATATGCTGATGCATTCAACTATATGGTTGTTGACGCACAAGATATTCCCGAACAGAATTTATTTAGTGTCTTTGAGGAAACAGGAGTTTATATCGACGAAGGAATTAACTCTGGAGGTGGTATCCTTGTGCACTGCCGAATGGGGAGATCTCGTTCAGCTTCTTGTGTGATAGCCTACTTGATG

Ace file of the UniGene sp_v3.0_unigene158611

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MAP kinase phosphatase with leucine-rich repeats protein 1 n=1 Tax=Dictyostelium discoideum RepID=MPL1_DICDI	-	-	1.0e-18	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G06110.2	-	3.0e-24	47%
RefSeq	Arabidopsis thaliana	NP_001189821.1	MAPK phosphatase 2 [Arabidopsis thaliana]	4.0e-24	47%
RefSeq	Populus trichocarpa	XP_002332403.1	predicted protein, partial [Populus trichocarpa]	4.0e-23	47%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A7T6

Fln msg: Distance to subject end: 46 aas, atg_distance in limit (1-15): atg_distance = 15, W2: There is no M at the beginning, your sequence is shorter than subject: 109 - 169

Fln protein: NELQYFESSSQIIPKLFLGNAKASYDYKMLKQRNITHILTVANSIIPKYADAFNYMVVDAQDIPEQNLFSVFEETGVYIDEGINSGGGILVHCRMGRSRSASCVIAYLM

Protein Length: 110

Fln nts: AAACGAACTTCAGTACTTTGAAAGCTCTTCTCAAATTATCCCAAAGCTATTCCTTGGAAATGCTAAAGCATCATATGACTATAAGATGCTGAAACAGCGCAACATCACACATATTCTCACTGTGGCAAATTCGATCATACCAAAATATGCTGATGCATTCAACTATATGGTTGTTGACGCACAAGATATTCCCGAACAGAATTTATTTAGTGTCTTTGAGGAAACAGGAGTTTATATCGACGAAGGAATTAACTCTGGAGGTGGTATCCTTGTGCACTGCCGAATGGGGAGATCTCGTTCAGCTTCTTGTGTGATAGCCTACTTGATG

Fln Alignment:

HLKU4M004JEUA5___LFLGNAKASYDYKMLKQRNITHILTVANSIIPKYADAFNYMVVDAQDIPEQNLFSVFEETGVYIDEGINSGGGILVHCRMGRSRSASCVIAYLM
D5A7T6________________LFLGSVGAASNKGVLKSLNITHVLLVANALVPAYPRDFKYMQVEVLDSVNTNLVQHFEECFSFIDEAKREGGGVLVHCFAGRSRSVTVIVAYLM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain