SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158449

Length: 192 nt

UniGene Fasta

>sp_v3.0_unigene158449
AGCTTGCCCCAGCGCCGAATCTTAAATTTATTTATTCAACATCGGTAATGCAGTCCCACCCCTTGCGCTTCGTTTTCTTGGGTCCTCCTGGCAGTGGAAAGGGCACCCAAGCCGATTATTTGAAGAAGGACTACAGGGTGTGCCATCTTTCTACTGGCGACATGCTTCGTGCCGCCGTTTCTGAGGGCACTG

Ace file of the UniGene sp_v3.0_unigene158449

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Adenylate kinase n=1 Tax=Dictyostelium fasciculatum RepID=F4PYB6_9MYCE	-	-	4.0e-12	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%

Source	ECs	Term	Type	e value	Identity
Sma3	Adenylate kinase.	EC:2.7.4.3	-	1.119e-07	-

Source	KEGGs	Term	e value	Identity
Sma3	Purine metabolism	00230	1.119e-07	%
Sma3	Metabolic pathways	01100	1.119e-07	%
Sma3	Biosynthesis of secondary metabolites	01110	1.119e-07	%

Source	Gene names
Sma3	ADK1; ADK2; AT5G63400; At5g50370; At5g63400; MLE2.3; MXI22.8; RCOM_1081020;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plastid	GO:0009536	Cellular Component	-
Sma3	adenylate kinase activity	GO:0004017	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	nucleobase-containing compound metabolic process	GO:0006139	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Adenylate kinase	IPR000850	-	-
Sma3	Adenylate kinase, subfamily	IPR006259	-	-
Sma3	Adenylate kinase, active site lid domain	IPR007862	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G63400.1	ADK1 adenylate kinase 1 chr5:25393274-25394817 REVERSE LENGTH=246	3.0e-14	66%
RefSeq	Arabidopsis thaliana	NP_001032129.1	adenylate kinase 1 [Arabidopsis thaliana]	2.0e-14	66%
RefSeq	Populus trichocarpa	XP_002318714.1	predicted protein [Populus trichocarpa]	6.0e-13	61%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9G6

Fln msg: Distance to subject end: 171 aas, atg_distance in limit (1-15): atg_distance = 13, your sequence is shorter than subject: 48 - 246

Fln protein: MQSHPLRFVFLGPPGSGKGTQADYLKKDYRVCHLSTGDMLRAAVSEGT

Protein Length: 49

Fln nts: AGCTTGCCCCAGCGCCGAATCTTAAATTTATTTATTCAACATCGGTA_-_ATGCAGTCCCACCCCTTGCGCTTCGTTTTCTTGGGTCCTCCTGGCAGTGGAAAGGGCACCCAAGCCGATTATTTGAAGAAGGACTACAGGGTGTGCCATCTTTCTACTGGCGACATGCTTCGTGCCGCCGTTTCTGAGGGCACTG

Fln Alignment:

HLKU4M004IVYEC___RFVFLGPPGSGKGTQADYLKKDYRVCHLSTGDMLRAAVSEGT
D5A9G6________________RLILVGPPGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain