SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158353

Length: 166 nt

UniGene Fasta

>sp_v3.0_unigene158353
CATTCAGCACGTATTAAGCACAGGAAACCTTTGCACTCGCGAAGTATATGATTACCTGAAGTCGTTAGCATCAGACGTCAATGTTGTACGAGGAGATTTTGATGAGAATACTAGCTACCCTGACACGAAGTGATCACGCTGGGCCAGTTCAAGATCGGCCTCTGCC

Ace file of the UniGene sp_v3.0_unigene158353

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	62%

Source	Gene names
Sma3	PHYPADRAFT_202685; PHYPADRAFT_234805;

Source	GOs	Term	Type	e value	Identity
Sma3	hydrolase activity	GO:0016787	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphodiesterase MJ0936	IPR000979	-	0.0	-
Sma3	Metallophosphoesterase domain	IPR004843	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G47810.2	-	5.0e-14	53%
RefSeq	Arabidopsis thaliana	NP_974399.2	vacuolar protein sorting 29 protein [Arabidopsis thaliana]	6.0e-14	53%
RefSeq	Populus trichocarpa	XP_002316742.1	predicted protein [Populus trichocarpa]	2.0e-13	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NZ66

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 101 aas, your sequence is shorter than subject: 44 - 187

Fln protein: IQHVLSTGNLCTREVYDYLKSLASDVNVVRGDFDENTSYPDTK*

Protein Length: 45

Fln nts: CATTCAGCACGTATTAAGCACAGGAAACCTTTGCACTCGCGAAGTATATGATTACCTGAAGTCGTTAGCATCAGACGTCAATGTTGTACGAGGAGATTTTGATGAGAATACTAGCTACCCTGACACGAAGTGATCACGCTGGGCCAGTTCAAGATCGGCCTCTGCC

Fln Alignment:

HLKU4M004INT3Q___IQHVLSTGNLCTREVYDYLKSLASDVNVVRGDFDENTSYPDTK
A9NZ66________________IQHIISPGNLCIKEVYDYLKSLCPDLHVTRGEYDEDPRYPETK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain