SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158237

Length: 308 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene158237
ACAAGAAATTTCATTAATCATTATGATTTGATATTTCCTGATAATTCTGTCCCTCCCATTGAAATTGTGGAACAATTTCTGGAGATTGTCGAAAAAGAATCTGGGGTAATAGCAGTGCATTGTAAGCAGGGTTTAGGAAGAACGGGCACTTTAATTGCCTGCTATTTAATTAAACATTATAATTTCACCGCCAAACAAGCTACTGGTTATATTCGATTATGTCGACCAGGATCAATCATTGCTATTCAACAATCTTTTCTTGAAAGAATCGAAGAAAGTTTAAAGAAAAGTAAAACAATCAAAGGCAC

Ace file of the UniGene sp_v3.0_unigene158237 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to Dual specificity protein phosphatase CDC14A (CDC14 cell division cycle 14 homolog A) n=1 Tax=Nasonia vitripennis RepID=UPI00015B4234	-	-	1.0e-26	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	41%

Source	Gene names
Sma3	CDC14; CHLREDRAFT_112184; PHYPADRAFT_88026; cdc14;

Source	GOs	Term	Type	Identity
Sma3	protein tyrosine phosphatase activity	GO:0004725	Molecular Function	-
Sma3	protein tyrosine/serine/threonine phosphatase activity	GO:0008138	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Dual specificity phosphatase, catalytic domain	IPR000340	-	-
Sma3	Protein-tyrosine/Dual-specificity phosphatase	IPR000387	-	-
Sma3	Protein-tyrosine phosphatase, active site	IPR016130	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUV5

Fln msg: Distance to subject end: 51 aas, your sequence is shorter than subject: 102 - 275

Fln protein: TRNFINHYDLIFPDNSVPPIEIVEQFLEIVEKESGVIAVHCKQGLGRTGTLIACYLIKHYNFTAKQATGYIRLCRPGSIIAIQQSFLERIEESLKKSKTIKG

Protein Length: 103

Fln nts: ACAAGAAATTTCATTAATCATTATGATTTGATATTTCCTGATAATTCTGTCCCTCCCATTGAAATTGTGGAACAATTTCTGGAGATTGTCGAAAAAGAATCTGGGGTAATAGCAGTGCATTGTAAGCAGGGTTTAGGAAGAACGGGCACTTTAATTGCCTGCTATTTAATTAAACATTATAATTTCACCGCCAAACAAGCTACTGGTTATATTCGATTATGTCGACCAGGATCAATCATTGCTATTCAACAATCTTTTCTTGAAAGAATCGAAGAAAGTTTAAAGAAAAGTAAAACAATCAAAGGCAC

Fln Alignment:

HLKU4M004JUKUG___VHCKQGLGRTGTLIACYLIKHYNFTAKQATGYIRLCRPGSIIAIQQ
A9NUV5________________VHCKAGRGRSTTIVLCYLVEHKGMGPVDAYAYVRSKRPRVLLAASQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain