SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene158179

Length: 220 nt

UniGene Fasta

>sp_v3.0_unigene158179
TCTCGGCAGAGGCGATTGCACGACCAGGTTTCTTCACTGGAGTCTCAACTGTTTGCTCCAAACTTTTCAACATCGTACAACCGACGAAGGCGTTCTTTGGTCAGAAGGATGCTGTTCAAACGATTGTCTTAAGGAGAGTGGTGGAAGAGTTGAACTTTCCTGTCGAGTTGGAAATAGTGGAAACCAAGAGAGAACACGATGGATTGGCAATGTCTTCTCG

Ace file of the UniGene sp_v3.0_unigene158179

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pantothenate synthetase n=2 Tax=Chloroflexus RepID=PANC_CHLAA	-	-	8.0e-19	67%
FL-Next	sp=Pantoate--beta-alanine ligase; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	52%

Source	Gene names
Sma3	PHATRDRAFT_22955; THAPSDRAFT_36774;

Source	InterPros	Term	Type	e value	Identity
Sma3	Pantoate-beta-alanine ligase	IPR003721	-	0.0	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G48840.1	PANC, PTS, ATPTS homolog of bacterial PANC chr5:19803823-19805041 REVERSE LENGTH=310	1.0e-16	52%
RefSeq	Arabidopsis thaliana	NP_199695.1	pantoate--beta-alanine ligase [Arabidopsis thaliana]	2.0e-16	52%
RefSeq	Populus trichocarpa	XP_002301775.1	predicted protein [Populus trichocarpa]	3.0e-15	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9FKB3

Fln msg: Distance to subject end: 95 aas, your sequence is shorter than subject: 72 - 310

Fln protein: SAEAIARPGFFTGVSTVCSKLFNIVQPTKAFFGQKDAVQTIVLRRVVEELNFPVELEIVETKREHDGLAMSS

Protein Length: 73

Fln nts: TCTCGGCAGAGGCGATTGCACGACCAGGTTTCTTCACTGGAGTCTCAACTGTTTGCTCCAAACTTTTCAACATCGTACAACCGACGAAGGCGTTCTTTGGTCAGAAGGATGCTGTTCAAACGATTGTCTTAAGGAGAGTGGTGGAAGAGTTGAACTTTCCTGTCGAGTTGGAAATAGTGGAAACCAAGAGAGAACACGATGGATTGGCAATGTCTTCTCG

Fln Alignment:

HLKU4M004JEQX4___ARPGFFTGVSTVCSKLFNIVQPTKAFFGQKDAVQTIVLRRVVEELNFPVELEIVETKREHDGLAMSS
Q9FKB3________________SRPVFFRGVATIVTKLFNIVEPDVALFGKKDYQQWRIIQRMVRDLNFGIEIVGSDIAREKDGLAMSS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain