SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene157521

Length: 241 nt

UniGene Fasta

>sp_v3.0_unigene157521
AGCTGGAGGTGTGTGTCCCCTTCCTCACGGGTCTGTGCACCAGTAAGTACACTGGACACTGGCATAATAACAACATGCACCACAAGGGAAAGTTTGACTTTGCCAATGGATCGTTCTATCGAGGAATGTTCGATGTCAATACAAAACATGGTAAAGGTATCTACACTTGGCCCAATGGAAATGAGTACAAAGGAGAGTTCCACCACGACAGACTGTGCGGTACTGGCGAGATGAAGTACCA

Ace file of the UniGene sp_v3.0_unigene157521

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MORN repeat variant family protein n=1 Tax=Ectocarpus siliculosus RepID=D7FWY6_ECTSI	-	-	7.0e-12	46%
FL-Next	sp=Phosphatidylinositol 4-phosphate 5-kinase 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	37%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O48709

Fln msg: Distance to subject end: 514 aas, your sequence is shorter than subject: 79 - 705

Fln protein: LEVCVPFLTGLCTSKYTGHWHNNNMHHKGKFDFANGSFYRGMFDVNTKHGKGIYTWPNGNEYKGEFHHDRLCGTGEMKY

Protein Length: 80

Fln nts: AGCTGGAGGTGTGTGTCCCCTTCCTCACGGGTCTGTGCACCAGTAAGTACACTGGACACTGGCATAATAACAACATGCACCACAAGGGAAAGTTTGACTTTGCCAATGGATCGTTCTATCGAGGAATGTTCGATGTCAATACAAAACATGGTAAAGGTATCTACACTTGGCCCAATGGAAATGAGTACAAAGGAGAGTTCCACCACGACAGACTGTGCGGTACTGGCGAGATGAAGTACCA

Fln Alignment:

HLKU4M004IPKH7___GLCTSKYTGHWHNNNMHHKGKFDFANGSFYRGMFDVNTKHGKGIYTWPNGNEYKGEFHHDRLCGTGEMKY
O48709________________GIDGDTYRGHWLWGRKHGYGEKRYANGDGYQGNWKANLQDGNGRYVWSDGNEYVGEWKNGVISGKGKMTW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain