SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene157510

Length: 174 nt

UniGene Fasta

>sp_v3.0_unigene157510
TTGTGAAATGCCTGAGAAGCCAATTCTGTATTCATACTGGCGTAGCAGTTGTTCCTGGCGAGTTAGAATCGCCTTGGCTCTGAAAAAGATTGATTATGAATACAAAGCTGTAAATCTTATTCATGATGGAGGAGATCAAAACAAGGAAGAATATCGTAAAATGAACCCGATGGG

Ace file of the UniGene sp_v3.0_unigene157510

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glutathione S-transferase zeta n=1 Tax=Tigriopus japonicus RepID=B3VHS6_9MAXI	-	-	1.0e-16	69%
FL-Next	tr=Glutathione S-transferases zeta 2; Pinus brutia.	-	-	0.0	67%

Source	ECs	Term	Type	e value	Identity
Sma3	Glutathione transferase.	EC:2.5.1.18	-	7.23e-10	-

Source	KEGGs	Term	e value	Identity
Sma3	Glutathione metabolism	00480	7.23e-10	%
Sma3	Metabolism of xenobiotics by cytochrome P450	00980	7.23e-10	%
Sma3	Drug metabolism - cytochrome P450	00982	7.23e-10	%

Source	Gene names
Sma3	At2g02380; At2g02390; GST18; GSTZ; GSTZ1; GSTZ3; GSVIVT00035382001; OJ1712_E04.21; Os02g0564000; OsI_07693; OsJ_07166; P0020C11.10; T16F16.17; T16F16.18; gst2;

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	glutathione transferase activity	GO:0004364	Molecular Function	-
Sma3	transferase activity	GO:0016740	Molecular Function	-
Sma3	isomerase activity	GO:0016853	Molecular Function	-
Sma3	aromatic amino acid family metabolic process	GO:0009072	Biological Process	-
Sma3	toxin catabolic process	GO:0009407	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glutathione S-transferase, N-terminal	IPR004045	-	-
Sma3	Glutathione S-transferase, C-terminal	IPR004046	-	-
Sma3	Maleylacetoacetate isomerase	IPR005955	-	-
Sma3	Glutathione S-transferase, C-terminal-like	IPR010987	-	-
Sma3		IPR012335	-	-
Sma3	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G02380.1	ATGSTZ2, GSTZ2 glutathione S-transferase (class zeta) 2 chr2:626878-628569 FORWARD LENGTH=223	5.0e-15	63%
RefSeq	Arabidopsis thaliana	NP_849926.2	glutathione S-transferase zeta-class 1 [Arabidopsis thaliana]	2.0e-15	64%
RefSeq	Populus trichocarpa	XP_002320724.1	predicted protein [Populus trichocarpa]	3.0e-13	55%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: H6UZH1

Fln msg: Distance to subject end: 159 aas, atg_distance in limit (1-15): atg_distance = 12, your sequence is shorter than subject: 55 - 226

Fln protein: MPEKPILYSYWRSSCSWRVRIALALKKIDYEYKAVNLIHDGGDQNKEEYRKMNPM

Protein Length: 56

Fln nts: TTGTGAA_-_ATGCCTGAGAAGCCAATTCTGTATTCATACTGGCGTAGCAGTTGTTCCTGGCGAGTTAGAATCGCCTTGGCTCTGAAAAAGATTGATTATGAATACAAAGCTGTAAATCTTATTCATGATGGAGGAGATCAAAACAAGGAAGAATATCGTAAAATGAACCCGATGGG

Fln Alignment:

HLKU4M004JP0C7___LYSYWRSSCSWRVRIALALKKIDYEYKAVNLIHDGGDQNKEEYRKMNPM
H6UZH1________________LYSYWRSSCSWRVRIALNLKGLPYEYKAVNIVQ--GEQFSEEFTKLNPL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain