SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene156265

Length: 250 nt

UniGene Fasta

>sp_v3.0_unigene156265
ACAAACTCGATATTTTTAAAAATAACAACAACAGCAGCAAAAATGATGGCTAATCAACGAGTTTGTTCATTTCTAGGTAGACAGGTTCGAAGCTTCTCTTCGTCGCCCGTTGTTAATGCCGAGAAGATTCAGGCGCCTCTTCAACTCTATGGCCTTGAGGGACGTTACACGCATGCTATTTATGCAGCTGCTGCGCGCAAAAATCAGCTGGACTCTGTCGACAAGGACTTTCAGAATTTGGGTGCCATTT

Ace file of the UniGene sp_v3.0_unigene156265

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP synthase subunit O, mitochondrial n=1 Tax=Sorex araneus RepID=ATPO_SORAR	-	-	2.0e-07	50%
FL-Next	sp=ATP synthase subunit O, mitochondrial; Ipomoea batatas (Sweet potato) (Convolvulus batatas).	-	-	0.0	29%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: sp_plants

Fln subject: P22778

Fln msg: Distance to subject end: 148 aas, atg_distance in limit (1-15): atg_distance = 11, W2: There is no M at the beginning, your sequence is shorter than subject: 83 - 244

Fln protein: TNSIFLKITTTAAKMMANQRVCSFLGRQVRSFSSSPVVNAEKIQAPLQLYGLEGRYTHAIYAAAARKNQLDSVDKDFQNLGAI

Protein Length: 84

Fln nts: ACAAACTCGATATTTTTAAAAATAACAACAACAGCAGCAAAAATGATGGCTAATCAACGAGTTTGTTCATTTCTAGGTAGACAGGTTCGAAGCTTCTCTTCGTCGCCCGTTGTTAATGCCGAGAAGATTCAGGCGCCTCTTCAACTCTATGGCCTTGAGGGACGTTACACGCATGCTATTTATGCAGCTGCTGCGCGCAAAAATCAGCTGGACTCTGTCGACAAGGACTTTCAGAATTTGGGTGCCATTT

Fln Alignment:

HLKU4M004I5EXY___SIFLKITTTAAKMMANQRV-CSFLGRQ--VRSFSSSPVVNAEKIQAPLQLYGLEGRYTHAIYAAAARKNQLDSVDKDFQNL
P22778________________SILQKALSSAQRSNAHRSILCPTLSNSELLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain