SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene152675

Length: 112 nt

UniGene Fasta

>sp_v3.0_unigene152675
GCCGTCAACAAGTACTTGGTCAAGTACGCCGGCAAGGACGCTTTCCACCTCCGAGTTCGCGCTCACCCGTACCACGTGATTCGTATCAACAAGATGTTATCATGCGCAGGCG

Ace file of the UniGene sp_v3.0_unigene152675

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribosomal protein L10e n=1 Tax=Blastocystis hominis RepID=D8M5D8_BLAHO	-	-	8.0e-12	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Sma3	60S ribosomal protein L10	-	-	5.65e-14	-

Source	Gene names
Sma3	ACI29; AT1G66580; At1g14320; At1g26910; At1g66580; CHLREDRAFT_195584; F14L17.9; GSVIVT00006249001; GSVIVT00023920001; LOC_Os03g21470; LP20; MICPUCDRAFT_24102; MICPUN_93045; OSTLU_30754; Os03g0332500; OsI_017927; OsI_034350; OsI_11423; OsI_18615; OsJ_10719

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	acid phosphatase activity	GO:0003993	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein L10e	IPR001197	-	-
Sma3	Acid phosphatase (Class B)	IPR005519	-	-
Sma3	Acid phosphatase, plant	IPR010028	-	-
Sma3	Ribosomal protein L10e/L16	IPR016180	-	-
Sma3	Ribosomal protein L10e, conserved site	IPR018255	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G14320.1	SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein chr1:4888270-4889408 FORWARD LENGTH=220	9.0e-17	81%
RefSeq	Arabidopsis thaliana	NP_563945.2	60S ribosomal protein L10-1 [Arabidopsis thaliana]	1.0e-16	81%
RefSeq	Populus trichocarpa	XP_002326063.1	predicted protein [Populus trichocarpa]	6.0e-17	81%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NPT9

Fln msg: Distance to subject end: 121 aas, your sequence is shorter than subject: 37 - 228

Fln protein: AVNKYLVKYAGKDAFHLRVRAHPYHVIRINKMLSCAG

Protein Length: 38

Fln nts: GCCGTCAACAAGTACTTGGTCAAGTACGCCGGCAAGGACGCTTTCCACCTCCGAGTTCGCGCTCACCCGTACCACGTGATTCGTATCAACAAGATGTTATCATGCGCAGGCG

Fln Alignment:

HLKU4M004IVUJA___AVNKYLVKYAGKDAFHLRVRAHPYHVIRINKMLSCAG
A9NPT9________________ACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain