SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene150869

Length: 400 nt

UniGene Fasta

>sp_v3.0_unigene150869
ACACTGTAGAGCGTTTTTGCCCTTCTGGCATGATCAAGTGGTCCCTACTCTAAAGGGCGGAAAGCATGTATTGATCGCCGCTCACGGAAACTCCATCCGTGCTCTGGTCAAGTATCTAGACAAAGTGCCAGACAATGAGATTGTAGAGCTGAACATACCGACCGGTATTCCGCTAGTCTACGAGCTAGACATCAACTTGAAGCCGATCAAGCACTACTATCTAGCCGACGAGGCCACCGTAAAAGCTGCGATCAACGCCGTGGCCAACCAAGGCAAGGCCAAGTAGACAAATATCAAACACACGATCTAGACATCCAGTGAAATGTCTCAGTTATTCTCGAATTTAGTTTAAATTTAAGAGACTATATAAATGTTTTAGACCTTAGCGCTTTTCATTAAT

Ace file of the UniGene sp_v3.0_unigene150869

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phosphoglycerate mutase n=1 Tax=Brachionus plicatilis RepID=C8KI28_BRAPC	-	-	2.0e-39	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	49%
Sma3	Phosphoglycerate mutase	-	-	1.519e-25	-

Source	Gene names
Sma3	CHLREDRAFT_99328; PGAM1; PGAM2; PGAM_4; PGAM_6; PGM5; PHATRDRAFT_33839; PHATRDRAFT_51298; THAPSDRAFT_27850; THAPSDRAFT_28350;

Source	GOs	Term	Type	e value	Identity
Sma3	intramolecular transferase activity, phosphotransferases	GO:0016868	Molecular Function	0.0	-
Sma3	glycolysis	GO:0006096	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	-
Sma3	Phosphoglycerate mutase 1	IPR005952	-	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G22170.1	Phosphoglycerate mutase family protein chr1:7826603-7828055 FORWARD LENGTH=334	7.0e-13	49%
RefSeq	Arabidopsis thaliana	NP_564161.1	phosphoglycerate mutase-like protein [Arabidopsis thaliana]	1.0e-12	49%
RefSeq	Populus trichocarpa	XP_002307392.1	predicted protein [Populus trichocarpa]	9.0e-13	47%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVC7

Fln msg: your sequence is shorter than subject: 95 - 352

Fln protein: HCRAFLPFWHDQVVPTLKGGKHVLIAAHGNSIRALVKYLDKVPDNEIVELNIPTGIPLVYELDINLKPIKHYYLADEATVKAAINAVANQGKAK*

Protein Length: 96

Fln nts: ACACTGTAGAGCGTTTTTGCCCTTCTGGCATGATCAAGTGGTCCCTACTCTAAAGGGCGGAAAGCATGTATTGATCGCCGCTCACGGAAACTCCATCCGTGCTCTGGTCAAGTATCTAGACAAAGTGCCAGACAATGAGATTGTAGAGCTGAACATACCGACCGGTATTCCGCTAGTCTACGAGCTAGACATCAACTTGAAGCCGATCAAGCACTACTATCTAGCCGACGAGGCCACCGTAAAAGCTGCGATCAACGCCGTGGCCAACCAAGGCAAGGCCAAGTAG___ACAAATATCAAACACACGATCTAGACATCCAGTGAAATGTCTCAGTTATTCTCGAATTTAGTTTAAATTTAAGAGACTATATAAATGTTTTAGACCTTAGCGCTTTTCATTAAT

Fln Alignment:

HLKU4M004I9DNC___FWHDQVVPTLKGGKHVLIAAHGNSIRALVKYLDKVPDNEIVELNIPTGIPLVY
A9NVC7________________YFKEQIVPQLDCGKNVMIAAHGNSLRSIIMYLDKLSSQEVISLELSTGIPMLY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain