SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene150583

Length: 270 nt

UniGene Fasta

>sp_v3.0_unigene150583
AAACTGGAGGTTGACCGAGATATTGCCCTTGTTAACAAGTGGCTAGATTGGCTGAAGGAGGAGTATTTGGTTCCCGATTCTTGGTGGTTGGAGAAGAATAAAGGGATGGTACAGGAGAAGGACGGGCACTGGCGAATGGCCCAACCGCCACTTGAATATCGTCCACTGCCTAACAACGAGGATTAGTCATCGCGGGCTTCTCACTGAGATGCATGAATGAAGCCGATATCACGATAATAACAATGGTTGATATACATACATATCTACCAC

Ace file of the UniGene sp_v3.0_unigene150583

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Triacylglycerol lipase, putative n=1 Tax=Ricinus communis RepID=B9S985_RICCO	-	-	1.0e-11	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Sma3	Triacylglycerol lipase, putative	-	-	8.904e-08	-

Source	Gene names
Sma3	GSVIVT00035897001; OsI_03083; OsI_03092; OsJ_02836; OsJ_02844; POPTRDRAFT_713858; RCOM_0553860; RCOM_1014390;

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G42690.1	alpha/beta-Hydrolases superfamily protein chr2:17776356-17777682 REVERSE LENGTH=412	1.0e-14	56%
RefSeq	Arabidopsis thaliana	NP_181797.1	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]	1.0e-14	56%
RefSeq	Populus trichocarpa	XP_002316835.1	predicted protein [Populus trichocarpa]	8.0e-15	56%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRW1

Fln msg: your sequence is shorter than subject: 62 - 412

Fln protein: KLEVDRDIALVNKWLDWLKEEYLVPDSWWLEKNKGMVQEKDGHWRMAQPPLEYRPLPNNED*

Protein Length: 63

Fln nts: AAACTGGAGGTTGACCGAGATATTGCCCTTGTTAACAAGTGGCTAGATTGGCTGAAGGAGGAGTATTTGGTTCCCGATTCTTGGTGGTTGGAGAAGAATAAAGGGATGGTACAGGAGAAGGACGGGCACTGGCGAATGGCCCAACCGCCACTTGAATATCGTCCACTGCCTAACAACGAGGATTAG___TCATCGCGGGCTTCTCACTGAGATGCATGAATGAAGCCGATATCACGATAATAACAATGGTTGATATACATACATATCTACCAC

Fln Alignment:

HLKU4M004I6BJ4___KLEVDRDIALVNKWLDWLKEEYLVPDSWWLEKNKGMVQEKDGHWRMAQPPLE
B8LRW1________________KLEVDRDIALVNKSTDWLKDEYLVPVSWWVEKNKGMVQGNDGHWLMAKPPDE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain