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UniGene Name: sp_v3.0_unigene150282
Length: 168 nt
 UniGene Fasta
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| >sp_v3.0_unigene150282
G |
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Ace file of the UniGene sp_v3.0_unigene150282
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Dihydropinosylvin synthase n=6 Tax=Pinus RepID=DPSS_PINSY | - | - | 1.0e-19 | 97% |
| FL-Next | tr=Pinosylvin synthase; Pinus densiflora (Japanese red pine). | - | - | 0.0 | 100% |
| Sma3 | Chalcone synthase | - | - | 0.0 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Pinosylvin synthase. | EC:2.3.1.146 | - | 8.866e-06 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Stilbenoid, diarylheptanoid and gingerol biosynthesis | 00945 | 8.866e-06 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 8.866e-06 | % | |
| Sma3 | Naringenin-chalcone synthase. | EC:2.3.1.74 | - | 0.0 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Flavonoid biosynthesis | 00941 | 0.0 | % | |
| Sma3 | Biosynthesis of phenylpropanoids | 01061 | 0.0 | % | |
| Sma3 | Metabolic pathways | 01100 | 0.0 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 0.0 | % |
| Source | Gene names |
|---|---|
| Sma3 | CHS; CHS-1B; CHS-A; CHS-D; CHS-DII; CHS-DIII; CHS-DIV; CHS-E; CHS-FL1; CHS-LF1; CHS-LF2; CHS-LF3; CHS-LF4; CHS1; CHS11; CHS17; CHS1A; CHS1B; CHS2; CHS3; CHS4; CHS5; CHS6; CHS7; CHS8; CHS9; CHSA; CHSA2; CHSD; CHSE; CHSG; CHSJ; CSF7; Chs; CtCHS; EgCHS-A; Eg |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | GO:0008415 | Molecular Function | 0.0 | - | |
| Sma3 | naringenin-chalcone synthase activity | GO:0016210 | Molecular Function | 0.0 | - |
| Sma3 | pinosylvin synthase activity | GO:0050198 | Molecular Function | 0.0 | - |
| Sma3 | response to stress | GO:0006950 | Biological Process | 0.0 | - |
| Sma3 | biosynthetic process | GO:0009058 | Biological Process | 0.0 | - |
| Sma3 | flavonoid biosynthetic process | GO:0009813 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Chalcone/stilbene synthase, N-terminal | IPR001099 | - | 0.0 | - |
| Sma3 | Polyketide synthase, type III | IPR011141 | - | 0.0 | - |
| Sma3 | Chalcone/stilbene synthase, C-terminal | IPR012328 | - | 0.0 | - |
| Sma3 | Thiolase-like, subgroup | IPR016038 | - | 0.0 | - |
| Sma3 | Chalcone/stilbene synthase, active site | IPR018088 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G13930.1 | CHS, TT4, ATCHS Chalcone and stilbene synthase family protein chr5:4488762-4490035 FORWARD LENGTH=395 | 3.0e-11 | 75% |
| RefSeq | Arabidopsis thaliana | NP_196897.1 | chalcone synthase [Arabidopsis thaliana] | 4.0e-11 | 75% |
| RefSeq | Populus trichocarpa | XP_002303819.1 | chalcone synthase [Populus trichocarpa] | 2.0e-14 | 69% |
| Full-Lengther Next Prediction |
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Fln status: Putative N-terminus
Fln database: coniferopsida.fasta
Fln subject: Q9MBA9
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 250 aas, atg_distance in limit (1-15): atg_distance = 7, W2: There is no M at the beginning, your sequence is shorter than subject: 42 - 312
Fln protein:
E
Protein Length:
43
Fln nts:
G
Fln Alignment:
HLKU4M004JTBB2___EGFRKLQRADGFASILAIGTANPPNAVDQSTYPDYYFRITG
Q9MBA9________________EGFRKLQRADGFASILAIGTANPPNAVDQSTYPDYYFRITG
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
