SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene150146

Length: 376 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene150146 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	30S ribosomal protein S12 n=12 Tax=Alphaproteobacteria RepID=RS12_CAUSK	-	-	94%
FL-Next	sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast.	-	-	74%
Sma3	30S ribosomal protein S12, chloroplastic	-	-	-

Source	Gene names
Sma3	rps12; Grc000076;

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	small ribosomal subunit	GO:0015935	Cellular Component	-
Sma3	rRNA binding	GO:0019843	Molecular Function	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Ribosomal protein S12/S23	IPR006032	-	-
Sma3	Ribosomal protein S12, bacteria	IPR005679	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	ATCG00905.1	RPS12C, RPS12 ribosomal protein S12C chrC:97999-98793 REVERSE LENGTH=123	0.0	75%
RefSeq	Arabidopsis thaliana	NP_178773.1	ribosomal protein S12 [Arabidopsis thaliana]	1.99965e-42	59%
RefSeq	Populus trichocarpa	YP_001109526.1	ribosomal protein S12 (chloroplast) [Populus trichocarpa]	0.0	74%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain