SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene150005

Length: 173 nt

UniGene Fasta

>sp_v3.0_unigene150005
CTTACTTTGCCGTTCCAGGACGCGAATCTGTATGATCATGTATAAGAAGATCCACAAGGGAGATTATAAATGCCCGCCCTGGTTTTCCTCCGAAGTCCGCCGGCTCGTCCTCCGGTTGCTAGACCCTAACCCCCGGACGAGGATCACCGTTCCGCAGCTGATGGAGGTCCCCT

Ace file of the UniGene sp_v3.0_unigene150005

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CBL-interacting protein kinase 6 n=1 Tax=Cicer arietinum RepID=C0IRD0_CICAR	-	-	2.0e-08	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%

Source	Gene names
Sma3	CIPK; CIPK17; CIPK18; CIPK19; CIPK5; CIPK7; CIPK8; GSVIVT00033758001; GSVIVT00035857001; OsI_00833; POPTRDRAFT_235280; POPTRDRAFT_280429; POPTRDRAFT_669608; POPTRDRAFT_681270; POPTRDRAFT_800443; PvCIPK2; PvCIPK5; RCOM_0370920; VITISV_006470; VITISV_015398

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	signal transduction	GO:0007165	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	NAF domain	IPR004041	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	NAF/FISL domain	IPR018451	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G29230.1	CIPK18, SnRK3.20, ATWL1, WL1, ATCIPK18 CBL-interacting protein kinase 18 chr1:10214860-10216422 FORWARD LENGTH=520	1.0e-11	62%
RefSeq	Arabidopsis thaliana	NP_174217.1	CBL-interacting serine/threonine-protein kinase 18 [Arabidopsis thaliana]	2.0e-11	62%
RefSeq	Populus trichocarpa	XP_002316819.1	predicted protein, partial [Populus trichocarpa]	2.0e-12	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9K4

Fln msg: Distance to subject end: 166 aas, your sequence is shorter than subject: 57 - 431

Fln protein: LLCRSRTRICMIMYKKIHKGDYKCPPWFSSEVRRLVLRLLDPNPRTRITVPQLMEVP

Protein Length: 58

Fln nts: CTTACTTTGCCGTTCCAGGACGCGAATCTGTATGATCATGTATAAGAAGATCCACAAGGGAGATTATAAATGCCCGCCCTGGTTTTCCTCCGAAGTCCGCCGGCTCGTCCTCCGGTTGCTAGACCCTAACCCCCGGACGAGGATCACCGTTCCGCAGCTGATGGAGGTCCCCT

Fln Alignment:

HLKU4M002D98IV___MIMYKKIHKGDYKCPPWFSSEXXXXXXXXXDPNPRTRITVPQLMEVP
D5A9K4________________MVMYKKIYKGDYKCPPWFSSEVRRLVLRLLDPNPRTRITVPQLMEVP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain