SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene149940

Length: 214 nt

UniGene Fasta

>sp_v3.0_unigene149940
GCTCGTTCATCCGATGGGGTTGAGAATGACCAGCAATGGTTTCCGGGCGATGTTGCCGCCAGAGCGCTAGTGCACTACGCGACGAGCAGGATTCTCCCTCAGCAGAACAGAGGTGAGATCGATCTGACCCTTAAAGTTCTTTCTGTGAGAAGCCCCTGCAATTTCCTGGTCTTTGGCCTCGGGCACGACAGTGCAATGTGGAATGCTTTGAATG

Ace file of the UniGene sp_v3.0_unigene149940

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF579 domain containing protein	-	-	2.0e-07	44%
FL-Next	tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	61%
Sma3	Uncharacterized plant-specific domain TIGR01627 family protein, expressed	-	-	9.837e-09	-

Source	Gene names
Sma3	AT4g09990; At1g09610; At1g33800; At1g71690; At4g09990; F14J9.26; F14M2.8; F14O23.3; F26A9.8; GSVIVT00021863001; GSVIVT00021864001; GSVIVT00035299001; GSVIVT00035310001; LOC_Os11g29780; LOC_Os12g10320; MA4_111B14.64; Os11g0490100; Os12g0204500; OsI_10920;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Xylan biosynthesis protein IRX15/IRX15L	IPR006514	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G09610.1	Protein of unknown function (DUF579) chr1:3111789-3112637 FORWARD LENGTH=282	4.0e-17	63%
RefSeq	Arabidopsis thaliana	NP_172432.1	uncharacterized protein [Arabidopsis thaliana]	5.0e-17	63%
RefSeq	Populus trichocarpa	XP_002328791.1	predicted protein, partial [Populus trichocarpa]	4.0e-19	70%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: C6TKB9

Fln msg: Distance to subject end: 167 aas, your sequence is shorter than subject: 71 - 280

Fln protein: ARSSDGVENDQQWFPGDVAARALVHYATSRILPQQNRGEIDLTLKVLSVRSPCNFLVFGLGHDSAMWNALN

Protein Length: 72

Fln nts: GCTCGTTCATCCGATGGGGTTGAGAATGACCAGCAATGGTTTCCGGGCGATGTTGCCGCCAGAGCGCTAGTGCACTACGCGACGAGCAGGATTCTCCCTCAGCAGAACAGAGGTGAGATCGATCTGACCCTTAAAGTTCTTTCTGTGAGAAGCCCCTGCAATTTCCTGGTCTTTGGCCTCGGGCACGACAGTGCAATGTGGAATGCTTTGAATG

Fln Alignment:

HLKU4M002C0J9K___SDGVENDQQWFPGDVAARALVHYATSRILPQQNRGEIDLTLKVLSVRSPCNFLVFGLGHDSAMWNALN
C6TKB9________________SDGSCNKMK-IPGSVS-EALIHYSTSSITPQQTVKEISVTARVLEKKSPCNFLVFGLGHDSLMWNALN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain