SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene149584

Length: 193 nt

UniGene Fasta

>sp_v3.0_unigene149584
ATCTATCTATACCTATTATGAAGTCTGATTGAGAATTTTCGGCGGAGAATTTACTGGGAAAGGAAGAAGAGGAAAGGAGAGATGGCGACTCTGGGAGATATTGCAGTGGCGGGAGTCATAAATCTTTTGATCGCCCTTGGGTTTCTGTTGGCATTTACGTTTCTGAGGTTGCAGCCCATGAACGATAGAGTTT

Ace file of the UniGene sp_v3.0_unigene149584

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Early-responsive to dehydration-related protein; Populus euphratica (Euphrates poplar).	-	-	0.0	75%
Sma3	F12F1.17 protein	-	-	7.797e-06	-

Source	Gene names
Sma3	At1g11960; F12F1.17; POPTRDRAFT_811713; POPTRDRAFT_833957; RCOM_0903600;

Source	GOs	Term	Type	e value	Identity
Sma3	membrane	GO:0016020	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Domain of unknown function DUF221	IPR003864	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: G0ZAL1

Fln msg: Distance to subject end: 735 aas, your sequence is shorter than subject: 37 - 772

Fln protein: MATLGDIAVAGVINLLIALGFLLAFTFLRLQPMNDRV

Protein Length: 38

Fln nts: ATCTATCTATACCTATTATGAAGTCTGATTGAGAATTTTCGGCGGAGAATTTACTGGGAAAGGAAGAAGAGGAAAGGAGAG_-_ATGGCGACTCTGGGAGATATTGCAGTGGCGGGAGTCATAAATCTTTTGATCGCCCTTGGGTTTCTGTTGGCATTTACGTTTCTGAGGTTGCAGCCCATGAACGATAGAGTTT

Fln Alignment:

HIF1XHV02DLM2C___MATLGDIAVAGVINLLIALGFLLAFTFLRLQPMNDRV
G0ZAL1________________MATLGDIAVSGAINLLSAFIFLLAFAVLRIQPFNDRV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain