SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene149568

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene149568
GCAAAGCAGGAATTGAGAATGGCAGCTCCCATTGAAGTCAGTTATATCATGGCTCCTGAGCTGAACTAACAAATACTACTAGCAAATCCCCAAATGTAGCCATCATCGATGTCAGGGATGAGGAGAGAAGTCTGGATGCTCACATAGCAGGCTCCTTTCATTATGCAAGCGACACG

Ace file of the UniGene sp_v3.0_unigene149568

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Dual specificity phosphatase Cdc25, putative n=1 Tax=Ricinus communis RepID=B9RU89_RICCO	-	-	1.0e-06	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Sma3	Dual specificity phosphatase Cdc25, putative	-	-	3.899e-06	-

Source	Gene names
Sma3	POPTRDRAFT_282198; RCOM_1635810;

Source	InterPros	Term	Type	e value	Identity
Sma3	Rhodanese-like	IPR001763	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002326204.1	predicted protein, partial [Populus trichocarpa]	5.0e-11	82%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AAX3

Fln msg: Distance to subject end: 84 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 39 - 134

Fln protein: AELTNTTSKSPNVAIIDVRDEERSLDAHIAGSFHYASDT

Protein Length: 40

Fln nts: GCAAAGCAGGAATTGAGAATGGCAGCTCCCATTGAAGTCAGTTATATCATGGCTCCTGAGCTGAACTAACAAATACTACTAGCAAATCCCCAAATGTAGCCATCATCGATGTCAGGGATGAGGAGAGAAGTCTGGATGCTCACATAGCAGGCTCCTTTCATTATGCAAGCGACACG

Fln Alignment:

HIF1XHV02D9Q5Z___KSPNVAIIDVRDEERSLDAHIAGSFHYASDT
D5AAX3________________KSPNVAIIDVRDEERSLDGHIAGSFHYASDT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain