SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene149489

Length: 180 nt

UniGene Fasta

>sp_v3.0_unigene149489
ACCCGACAACAATGACCGCTTTTCCGACGACCGCAATGACTATGCGCACTCTGAACCCACCACTTATATTAATGCTCCATTCGTCGGTTGCCTCGCCTATTTGGCACAGTTCGGATCTTCGTTTTAGTAGCTGCAGAATTCTATTCTCCCGTCATATTGCCATATTGTTCCACTTCCCAG

Ace file of the UniGene sp_v3.0_unigene149489

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glyco_hydro_9 domain containing protein	-	-	4.0e-12	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Sma3	Endoglucanase 1	-	-	2.03e-08	-

Source	ECs	Term	Type	e value	Identity
Sma3	Cellulase.	EC:3.2.1.4	-	2.177e-08	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Starch and sucrose metabolism	00500		2.177e-08	%

Source	Gene names
Sma3	CEL1; Cel9; POPTRDRAFT_850247; PrCel1; PrCel2; RCOM_1179080;

Source	GOs	Term	Type	Identity
Sma3	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	-
Sma3	cellulase activity	GO:0008810	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-
Sma3	fruit ripening	GO:0009835	Biological Process	-
Sma3	cellulose catabolic process	GO:0030245	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 9	IPR001701	-	-
Sma3	Six-hairpin glycosidase	IPR012341	-	-
Sma3	Glycoside hydrolase, family 9, active site	IPR018221	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NUH0

Fln msg: your sequence is shorter than subject: 42 - 514

Fln protein: PDNNDRFSDDRNDYAHSEPTTYINAPFVGCLAYLAQFGSSF*

Protein Length: 43

Fln nts: ACCCGACAACAATGACCGCTTTTCCGACGACCGCAATGACTATGCGCACTCTGAACCCACCACTTATATTAATGCTCCATTCGTCGGTTGCCTCGCCTATTTGGCACAGTTCGGATCTTCGTTTTAG___TAGCTGCAGAATTCTATTCTCCCGTCATATTGCCATATTGTTCCACTTCCCAG

Fln Alignment:

HIF1XHV02DX1WC___YAHSEPTTYINAPFVGCLAYLA
A9NUH0________________YAHSEPTTYINAPLVGSLAYLA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain