SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene149231

Length: 245 nt

UniGene Fasta

>sp_v3.0_unigene149231
AAGTATTCCAAACAACCACAAAAGCACAATAATATAAATATGGCTGAAGTAGATCCTAAGAGAATCGACGGTGTGGCTATCGGCGGTCAGATCAGAGCTGAAATCAAGAAAGAAGTCGAAAGTCTGAAAGCAGCAGGCAAACGAGTTCCGGGAATTGGTGTTATCCTCGTTGGAGATCGTAAAGACTCCACTACTTATGTAAATATGAAGCAGAAAGCTTGCGTGGAAGCCGGCATCCACTTCGT

Ace file of the UniGene sp_v3.0_unigene149231

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methenyl-tetrahydrofolate cyclohydrolase [Triticum monococcum]	-	-	3.0e-11	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%

Source	Gene names
Sma3	MICPUCDRAFT_49533; MICPUN_108188; OSTLU_27405; PHATRDRAFT_23623; PHYPADRAFT_129285; PHYPADRAFT_150920;

Source	GOs	Term	Type	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	hydrolase activity	GO:0016787	Molecular Function	-
Sma3	folic acid-containing compound biosynthetic process	GO:0009396	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Tetrahydrofolate dehydrogenase/cyclohydrolase	IPR000672	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G12290.1	Amino acid dehydrogenase family protein chr3:3919591-3921326 FORWARD LENGTH=299	3.0e-15	56%
RefSeq	Arabidopsis thaliana	NP_187837.1	amino acid dehydrogenase family protein [Arabidopsis thaliana]	4.0e-15	56%
RefSeq	Populus trichocarpa	XP_002302571.1	tetrahydrofolate dehydrogenase/cyclohydrolase [Populus trichocarpa]	3.0e-14	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NV85

Fln msg: Distance to subject end: 228 aas, your sequence is shorter than subject: 81 - 393

Fln protein: KYSKQPQKHNNINMAEVDPKRIDGVAIGGQIRAEIKKEVESLKAAGKRVPGIGVILVGDRKDSTTYVNMKQKACVEAGIHF

Protein Length: 82

Fln nts: AAGTATTCCAAACAACCACAAAAGCACAATAATATAAATATGGCTGAAGTAGATCCTAAGAGAATCGACGGTGTGGCTATCGGCGGTCAGATCAGAGCTGAAATCAAGAAAGAAGTCGAAAGTCTGAAAGCAGCAGGCAAACGAGTTCCGGGAATTGGTGTTATCCTCGTTGGAGATCGTAAAGACTCCACTACTTATGTAAATATGAAGCAGAAAGCTTGCGTGGAAGCCGGCATCCACTTCGT

Fln Alignment:

HIF1XHV02EAARH___IDGVAIGGQIRAEIKKEVESLKAAGKRVPGIGVILVGDRKDSTTYVNMKQKACVEAGI
A9NV85________________IDGKAIAQEIRGEIAGEVSRMRDAVGKVPGLAVVLVGARKDSETYVRSKKKACEEVGI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain