SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148891

Length: 196 nt

UniGene Fasta

>sp_v3.0_unigene148891
TGTGTATATTGAGGCAAATAATTTGACTGGTATAGCTGGTAATGGGTCTTTTAGGGAAGTGGTGGCCTTTATCGATGGTATCCTTGTAGGTGCTGTGTGGCCTTTTTCCTGTGGTTCATACAGGAGGGATCAATCCACTGTTCTGGCGTCCTGTTACTGGTATTGGGTCATTTGATCTGCCCAGCTATGAGATTGA

Ace file of the UniGene sp_v3.0_unigene148891

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A; Short=PNGase A; AltName: Full=Glycopeptide N-glycosidase; AltName: Full=N-glycanase; Contains: RecName: Full=Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A light chain	-	-	8.0e-17	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%

Source	Gene names
Sma3	At3g14920; PHYPADRAFT_41788; POPTRDRAFT_1094130;

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G14920.1	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein chr3:5018275-5020104 FORWARD LENGTH=609	9.0e-19	83%
RefSeq	Arabidopsis thaliana	NP_188110.1	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thaliana]	1.0e-18	83%
RefSeq	Populus trichocarpa	XP_002316856.1	predicted protein [Populus trichocarpa]	8.0e-20	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX28

Fln msg: Overlapping hits, possible frame ERROR between 106 and 105, Distance to subject end: 250 aas, your sequence is shorter than subject: 65 - 578

Fln protein: VYIEANNLTGIAGNGSFREVVAFIDGILVGAVWPxxPVVHTGGINPLFWRPVTGIGSFDLPSYEI

Protein Length: 66

Fln nts: TGTGTATATTGAGGCAAATAATTTGACTGGTATAGCTGGTAATGGGTCTTTTAGGGAAGTGGTGGCCTTTATCGATGGTATCCTTGTAGGTGCTGTGTGGCCTxxxxxxCCTGTGGTTCATACAGGAGGGATCAATCCACTGTTCTGGCGTCCTGTTACTGGTATTGGGTCATTTGATCTGCCCAGCTATGAGATTGA

Fln Alignment:

HLKU4M001BMZW0___VYIEANNLTGIAGNGSFREVVAFIDGILVGAVWPxPVVHTGGINPLFWRPVTGIGSFDLPSYEI
A9NX28________________VYIEENNLTGTAGNGPFREVVAFIDGVLVGAVWPxPVVYTGGINPLFWRPVTGIGSFDLPSYEI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain