SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148809

Length: 400 nt

UniGene Fasta

>sp_v3.0_unigene148809
GAAGCTTTGTCTTGCTATTCTTCTTATCCTTGCACTGTTTTCCCAATCACACTTCTTCTTACATATTTAGTTTAGAAGATTGGCAATGACGATCAAGAGTAATAATAGAGCTGTGTACTTGTGCTTTCTTATATGGCTTCTAGTGTTCACTCTATCGCTGCGAACTAGCGATGGGCATGGGTGGAATAAGTACCCATTTAGAAGGCCTAGTAGGAATCTGGTTTTGTATTTCCACGATGTAATCTATGATGGTACCAACGCCAAGAACGCAACATCTACGCTTGTGGGTGCTCCCCACGGGGCTAAACTCACACATCTTGCTGCAAAAGACAACCACTTTGGAGACCTGGCGGTGTTCGATGATCCAATCACTCTCGACAATAATTTTCACTCCACCCCT

Ace file of the UniGene sp_v3.0_unigene148809

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Dirigent protein pDIR13 n=1 Tax=Picea engelmannii x Picea glauca RepID=Q27J99_9CONI	-	-	5.60519e-45	81%
FL-Next	tr=Dirigent protein pDIR13; Picea engelmannii x Picea glauca.	-	-	0.0	81%
Sma3	Dirigent-like protein	-	-	1.13505e-43	-

Source	Gene names
Sma3	DIR9; DPO; GSVIVT00002504001; GSVIVT00002505001; GSVIVT00002506001; GSVIVT00002507001; POPTRDRAFT_554436; POPTRDRAFT_554440; POPTRDRAFT_640410; POPTRDRAFT_640411; POPTRDRAFT_709225; POPTRDRAFT_711753; RCOM_1689510; RCOM_1689520; VITISV_013188; psd_Pop1; p

Source	InterPros	Term	Type	e value	Identity
Sma3	Plant disease resistance response protein	IPR004265	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002297996.1	predicted protein [Populus trichocarpa]	3.0e-25	57%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: Q27J99

Fln msg: Distance to subject end: 91 aas, your sequence is shorter than subject: 105 - 195

Fln protein: MTIKSNNRAVYLCFLIWLLVFTLSLRTSDGHGWNKYPFRRPSRNLVLYFHDVIYDGTNAKNATSTLVGAPHGAKLTHLAAKDNHFGDLAVFDDPITLDNNFHSTP

Protein Length: 106

Fln nts: GAAGCTTTGTCTTGCTATTCTTCTTATCCTTGCACTGTTTTCCCAATCACACTTCTTCTTACATATTTAGTTTAGAAGATTGGCA_-_ATGACGATCAAGAGTAATAATAGAGCTGTGTACTTGTGCTTTCTTATATGGCTTCTAGTGTTCACTCTATCGCTGCGAACTAGCGATGGGCATGGGTGGAATAAGTACCCATTTAGAAGGCCTAGTAGGAATCTGGTTTTGTATTTCCACGATGTAATCTATGATGGTACCAACGCCAAGAACGCAACATCTACGCTTGTGGGTGCTCCCCACGGGGCTAAACTCACACATCTTGCTGCAAAAGACAACCACTTTGGAGACCTGGCGGTGTTCGATGATCCAATCACTCTCGACAATAATTTTCACTCCACCCCT

Fln Alignment:

HLKU4M001BZSC4___MTIKSNNRAVYLCFLIWLLVFTLSLRTSDGHGWNKYPFRRPSRNLVLYFHDVIYDGTNAKNATSTLVGAPHGAKLTHLAAKDNHFGDLAVFDDPITLDNNFHSTP
Q27J99________________MAIKNNSRAVHLCF-VWLLVSTVSLQTSDGHRWKKYPLRKPTRNLVLYFHDVIYDGTNAKNATSTLVGAPHGANLTLLTGKDNHFGDLAVFDDPITLDNNFHSPP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain