SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148744

Length: 491 nt

UniGene Fasta

>sp_v3.0_unigene148744
CTGCCGGAGACTTTTCTAAGCGGCCAATATCTCACCTCGCCAAGCACGGCTCGACTGGCCGCAGCGGAGTTAGAGTGGTTGGATCATCGATCCCCGAGATCAGTCGTTTACGTGTCTTTTGGCAGCCAAAGCTGGATCTCCTCTTCTCAGATGATTGAATTAGCCTTGGGTTTAGAAGCAAGTGGGAAGCCATTTCTTTGGGTGGTGAGACTCCCAACTTGTGATGAGAAGAATCCCACCCTACATGGCTTCTACAGGCGCACAAAGCAGCAAGGGCACTTGTGGATGGATAGATCAGTTAGCCATCCTTTCTCACCCTTCTGTTGGGGCTTTTGTTACCCATTGTGGTTGGAACTCTGCACTGGAAGCCATCTCCATTGGCGTTCCTCTCATTTGTTGGCCGTTGTTTGCTGAACAGCACTTCAACGCGCGACTTATCGTGGACGAAGTGAAGGTTGGAATTGAGGTTGTGAGGCGTGAGGAGGATGAAA

Ace file of the UniGene sp_v3.0_unigene148744

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glucosyltransferase n=1 Tax=Sinningia cardinalis RepID=D7URL8_9LAMI	-	-	5.0e-29	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Sma3	Flavonoid glucosyl-transferase	-	-	5.248e-11	-

Source	ECs	Term	Type	e value	Identity
Sma3	Glucuronosyltransferase.	EC:2.4.1.17	-	5.575e-08	-

Source	KEGGs	Term	e value	Identity
Sma3	Pentose and glucuronate interconversions	00040	5.575e-08	%
Sma3	Ascorbate and aldarate metabolism	00053	5.575e-08	%
Sma3	Steroid hormone biosynthesis	00140	5.575e-08	%
Sma3	Starch and sucrose metabolism	00500	5.575e-08	%
Sma3	Other types of O-glycan biosynthesis	00514	5.575e-08	%
Sma3	Retinol metabolism	00830	5.575e-08	%
Sma3	Porphyrin and chlorophyll metabolism	00860	5.575e-08	%
Sma3	Metabolism of xenobiotics by cytochrome P450	00980	5.575e-08	%
Sma3	Drug metabolism - cytochrome P450	00982	5.575e-08	%
Sma3	Drug metabolism - other enzymes	00983	5.575e-08	%
Sma3	Metabolic pathways	01100	5.575e-08	%

Source	Gene names
Sma3	AdGt-3; AdGt-6; AmUGT21; At1g22340; At1g22370; At2g16890; At2g36790; At3g53150; At3g53160; B1060H01.39; B1267B06.2; B1342F01.33; CaUGT2; DcS6B11; Eg7GT-A; F13K3.19; GSVIVT00001851001; GSVIVT00001858001; GSVIVT00001860001; GSVIVT00001862001; GSVIVT00022033

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	glucuronosyltransferase activity	GO:0015020	Molecular Function	-
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	UDP-glucosyltransferase activity	GO:0035251	Molecular Function	-
Sma3	anthocyanidin 3-O-glucosyltransferase activity	GO:0047213	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	flavonol biosynthetic process	GO:0051555	Biological Process	-
Sma3	response to other organism	GO:0051707	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ABC-2 type transporter	IPR013525	-	-
Sma3	Peptidase C14, ICE, catalytic subunit p20, active site	IPR016129	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3		IPR018351	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G16520.3	-	3.0e-28	55%
RefSeq	Arabidopsis thaliana	NP_566550.1	UDP-glucosyl transferase 88A1 [Arabidopsis thaliana]	4.0e-28	55%
RefSeq	Populus trichocarpa	XP_002318525.1	predicted protein [Populus trichocarpa]	9.0e-30	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LRT1

Fln msg: Separated hits, possible frame ERROR between 219 and 284, Distance to subject end: 62 aas, your sequence is shorter than subject: 164 - 343

Fln protein: LPETFLSGQYLTSPSTARLAAAELEWLDHRSPRSVVYVSFGSQSWISSSQMIELALGLEASGKPFLWVVRLPxxxxxxxxxxxxxxxxxxxxxxxGWIDQLAILSHPSVGAFVTHCGWNSALEAISIGVPLICWPLFAEQHFNARLIVDEVKVGIEVVRREEDE

Protein Length: 165

Fln nts: CTGCCGGAGACTTTTCTAAGCGGCCAATATCTCACCTCGCCAAGCACGGCTCGACTGGCCGCAGCGGAGTTAGAGTGGTTGGATCATCGATCCCCGAGATCAGTCGTTTACGTGTCTTTTGGCAGCCAAAGCTGGATCTCCTCTTCTCAGATGATTGAATTAGCCTTGGGTTTAGAAGCAAGTGGGAAGCCATTTCTTTGGGTGGTGAGACTCCCAACxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGATGGATAGATCAGTTAGCCATCCTTTCTCACCCTTCTGTTGGGGCTTTTGTTACCCATTGTGGTTGGAACTCTGCACTGGAAGCCATCTCCATTGGCGTTCCTCTCATTTGTTGGCCGTTGTTTGCTGAACAGCACTTCAACGCGCGACTTATCGTGGACGAAGTGAAGGTTGGAATTGAGGTTGTGAGGCGTGAGGAGGATGAAA

Fln Alignment:

HLKU4M001B366D___LEWLDHRSPRSVVYVXXXXXXXXXXXQMIELALGLEASGKPFLWVVRLPTxxxxxxxxxxxxxxxxxxxxxxGWIDQLAILSHPSVGAFVTHCGWNSALEAISIGVPLICWPLFAEQHFNARLIVDEVKVGIEVVRREE
B8LRT1________________LQWLDEQAEASVLYISFGSENSISISQIEELAMGVEASGVKFVWVLRTPSxxxxxxxxxxxxxxxxxxxxxxGWAPQLSILAHPSTGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQIALEAPQRVE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain