SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148737

Length: 461 nt

UniGene Fasta

>sp_v3.0_unigene148737
GCGATGGGTCTCAAGGAAAGCGGACAGTTCTTTCTCTGGGCTCTACGTCCAGACATAGTCTCTTCTACAGTCTCAGACTGCTTACCAGACGGTTTTCTGGATGAGACGAAAATGCAGGGGATCGTTGTTCCATGGTGCAATCAGCTGCAAGTGTTATCCCATCCCTCCATTGCGGGTTTCATTACTCACTGCGGATGGAACTCAATGTTTGAAAGCATAGCGTTTGGAGTTCCCTTGGTGGGGTTTCCATTTTGGGCAGATCAATTCACCAACTGCAAGCTCATGGCTGATGAATGGAAGATTGGTTTCAGATTAAGCGGAGACGATGACGAACAAGATAACGGAGTGATAGTGAGGGGAGATGTATCTAAGGCTATCATTAAATTATTCTGTGACGAAGGCAAGGAGGTGAAGAAAAATGTTGAGGTCTTAAAAGAGAGTGCGAGAGCTGGAGTGCGTCA

Ace file of the UniGene sp_v3.0_unigene148737

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SCH3_RICCO	-	-	2.0e-31	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%
Sma3	UDP-glucose:glucosyltransferase	-	-	1.082e-09	-

Source	Gene names
Sma3	AT1G22360; At1g22400; At2g28080; At2g36970; CtGT11; DcT11; F12K8.26; GSVIVT00013560001; GSVIVT00022190001; GSVIVT00031199001; GSVIVT00036668001; PGT; POPTRDRAFT_1069472; POPTRDRAFT_1080227; POPTRDRAFT_1080231; POPTRDRAFT_767628; POPTRDRAFT_866540; RCOM_02

Source	GOs	Term	Type	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	trans-zeatin O-beta-D-glucosyltransferase activity	GO:0050403	Molecular Function	-
Sma3	cis-zeatin O-beta-D-glucosyltransferase activity	GO:0050502	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G36970.1	UDP-Glycosyltransferase superfamily protein chr2:15529050-15530712 FORWARD LENGTH=490	2.0e-35	48%
RefSeq	Arabidopsis thaliana	NP_181234.1	UDP-glycosyltransferase-like protein [Arabidopsis thaliana]	3.0e-35	48%
RefSeq	Populus trichocarpa	XP_002313147.1	UDP-glucoronosyl/UDP-glucosyltransferase [Populus trichocarpa]	8.0e-34	48%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PPT9

Fln msg: Distance to subject end: 22 aas, your sequence is shorter than subject: 153 - 487

Fln protein: AMGLKESGQFFLWALRPDIVSSTVSDCLPDGFLDETKMQGIVVPWCNQLQVLSHPSIAGFITHCGWNSMFESIAFGVPLVGFPFWADQFTNCKLMADEWKIGFRLSGDDDEQDNGVIVRGDVSKAIIKLFCDEGKEVKKNVEVLKESARAGVR

Protein Length: 154

Fln nts: GCGATGGGTCTCAAGGAAAGCGGACAGTTCTTTCTCTGGGCTCTACGTCCAGACATAGTCTCTTCTACAGTCTCAGACTGCTTACCAGACGGTTTTCTGGATGAGACGAAAATGCAGGGGATCGTTGTTCCATGGTGCAATCAGCTGCAAGTGTTATCCCATCCCTCCATTGCGGGTTTCATTACTCACTGCGGATGGAACTCAATGTTTGAAAGCATAGCGTTTGGAGTTCCCTTGGTGGGGTTTCCATTTTGGGCAGATCAATTCACCAACTGCAAGCTCATGGCTGATGAATGGAAGATTGGTTTCAGATTAAGCGGAGACGATGACGAACAAGATAACGGAGTGATAGTGAGGGGAGATGTATCTAAGGCTATCATTAAATTATTCTGTGACGAAGGCAAGGAGGTGAAGAAAAATGTTGAGGTCTTAAAAGAGAGTGCGAGAGCTGGAGTGCGTCA

Fln Alignment:

HLKU4M001B0AU4___AMGLKESGQFFLWALRPDIVSSTVSDCLPDGFLDETKMQGIVVPWCNQLQVLSHPSIAGFITHCGWNSMFESIAFGVPLVGFPFWADQFTNCKLMADEWKIGFRLSGDDDEQDNGVIVRGDVSKAIIKLFCDXXXXXXXXXXXXXXSARAGVR
C0PPT9________________AMGLKDSGQFFLWVLRPDIVSSTVSDCLPDGFLDEIKMQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESIALAVPMIGFPFWADQFTNCKLMADEWKIGYRFSGGGQAGDKGLIVRKDISSAIRQLFSEEGTEVKKNVEGLRDSARAAVR

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain