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UniGene Name: sp_v3.0_unigene148661
Length: 231 nt
 UniGene Fasta
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| >sp_v3.0_unigene148661
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Ace file of the UniGene sp_v3.0_unigene148661
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9S2B5_RICCO | - | - | 2.0e-34 | 81% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 51% |
| Sma3 | Alpha-amylase, putative | - | - | 3.014e-10 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Alpha-amylase. | EC:3.2.1.1 | - | 3.315e-08 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Starch and sucrose metabolism | 00500 | 3.315e-08 | % | |
| Sma3 | Metabolic pathways | 01100 | 3.315e-08 | % | |
| Sma3 | EC:3.2.1.6- | - | 1.855e-07 | - |
| Source | Gene names |
|---|---|
| Sma3 | AAM1; AMY10; AMY2; AMY3; AMY5; AMY9; Aamy2; Aamy3; At1g69830; At1g76130; GSVIVT00028996001; GSVIVT00038019001; MICPUCDRAFT_26488; MICPUCDRAFT_30498; MICPUN_96256; MICPUN_97885; OSJNBb0118P14.5; OSTLU_35756; OSTLU_46693; Os01g0715400; Os04g0403300; OsI_035 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | extracellular region | GO:0005576 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
| Sma3 | alpha-amylase activity | GO:0004556 | Molecular Function | 0.0 | - |
| Sma3 | calcium ion binding | GO:0005509 | Molecular Function | 0.0 | - |
| Sma3 | cation binding | GO:0043169 | Molecular Function | 0.0 | - |
| Sma3 | carbohydrate metabolic process | GO:0005975 | Biological Process | 0.0 | - |
| Sma3 | starch catabolic process | GO:0005983 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Phosphotransferase system, HPr histidine phosphorylation site | IPR001020 | - | 0.0 | - |
| Sma3 | Phosphoribosylglycinamide formyltransferase, active site | IPR001555 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, family 13 | IPR006046 | - | 0.0 | - |
| Sma3 | Glycosyl hydrolase, family 13, catalytic domain | IPR006047 | - | 0.0 | - |
| Sma3 | Alpha-amylase, C-terminal beta-sheet | IPR012850 | - | 0.0 | - |
| Sma3 | Alpha-amylase, plant | IPR013775 | - | 0.0 | - |
| Sma3 | Glycosyl hydrolase, family 13, all-beta | IPR013780 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, subgroup, catalytic domain | IPR013781 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT1G69830.1 | ATAMY3, AMY3 alpha-amylase-like 3 chr1:26288518-26293003 REVERSE LENGTH=887 | 3.00004e-41 | 81% |
| RefSeq | Arabidopsis thaliana | NP_564977.1 | alpha-amylase-like 3 [Arabidopsis thaliana] | 4.00001e-41 | 81% |
| RefSeq | Populus trichocarpa | XP_002324108.1 | predicted protein [Populus trichocarpa] | 1.0e-29 | 62% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NUX3
Fln msg: Distance to subject end: 139 aas, your sequence is shorter than subject: 77 - 448
Fln protein:
Y
Protein Length:
78
Fln nts:
T
Fln Alignment:
HLKU4M001CCTZM___YIQGSEPYFAVGEYWDSLSYTYGQMDHDQDAHRQRIIDWINATDGNAGAFDVTTKGILHTVLEKCEYWRLYDKKGKP
A9NUX3________________YLKNTSPKFAVGEVWDDMSYSDGRLAYDQGAHRQRLVDWVHSTGDGAAAFDFTTKGILQEAVKSNELWRLKDSNGKP
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
