SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148622

Length: 163 nt

UniGene Fasta

>sp_v3.0_unigene148622
ACACACGTCTTGGCTGTACTTCTTTCTACCATTGCCTCTGTTACAGTCTTCAGTCTCTTCGTCACAACTCTCTTGCACGCCTTCGTTTGGAAAACTCTCTTCCCCAACGACATGGCCATCGCAATAACGACCAAGCAGAGAAACAATATGGTCAACTCATCTC

Ace file of the UniGene sp_v3.0_unigene148622

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	sp=Guard cell S-type anion channel SLAC1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	60%

Source	Gene names
Sma3	GSVIVT00001037001; PHYPADRAFT_42715; RCOM_1681680;

Source	GOs	Term	Type	e value	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	C4-dicarboxylate transporter/malic acid transport protein	IPR004695	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G12480.1	OZS1, SLAC1, RCD3, CDI3 C4-dicarboxylate transporter/malic acid transport protein chr1:4257427-4259249 REVERSE LENGTH=556	1.0e-11	60%
RefSeq	Arabidopsis thaliana	NP_563909.1	C4-dicarboxylate transporter/malic acid transport protein [Arabidopsis thaliana]	1.0e-11	60%
RefSeq	Populus trichocarpa	XP_002329721.1	c4-dicarboxylate transporter/malic acid transport protein [Populus trichocarpa]	5.0e-11	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LD83

Fln msg: Distance to subject end: 32 aas, your sequence is shorter than subject: 54 - 556

Fln protein: THVLAVLLSTIASVTVFSLFVTTLLHAFVWKTLFPNDMAIAITTKQRNNMVNSS

Protein Length: 55

Fln nts: ACACACGTCTTGGCTGTACTTCTTTCTACCATTGCCTCTGTTACAGTCTTCAGTCTCTTCGTCACAACTCTCTTGCACGCCTTCGTTTGGAAAACTCTCTTCCCCAACGACATGGCCATCGCAATAACGACCAAGCAGAGAAACAATATGGTCAACTCATCTC

Fln Alignment:

HLKU4M001ASZ74___THVLAVLLSTIASVTVFSLFVTTLLHAFVWKTLFPNDMAIAITTKQ
Q9LD83________________SRALALTLSFISTAMVCVLFVSTLLHAFVWQTLFPNDLAIAITKRK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain