SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene145972

Length: 486 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene145972 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Intracellular pathogenesis-related protein PinmIII n=15 Tax=Pinus monticola RepID=O81134_PINMO	-	-	0.0	82%
FL-Next	tr=Putative uncharacterized protein; Pinus sylvestris (Scots pine).	-	-	0.0	93%
Sma3	Putative intracellular pathogenesis-related protein	-	-	1.215e-18	-

Source	Gene names
Sma3	PR10-1.1; PR10-1.10; PR10-1.11; PR10-1.12; PR10-1.13; PR10-1.14; PR10-1.2; PR10-1.3; PR10-1.4; PR10-1.5; PR10-1.6; PR10-1.7; PR10-1.8; PR10-1.9; m007d; m007g; picg1; picg2; picg4; pig4; pr-10;

Source	GOs	Term	Type	e value	Identity
Sma3	defense response	GO:0006952	Biological Process	0.0	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Bet v I domain	IPR000916	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002304993.1	predicted protein [Populus trichocarpa]	1.0e-24	45%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
459		33		66	0.997452
462		33	33	33	0.99774
463	33	33		33	0.99774

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain