SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene144641

Length: 935 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene144641

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Sma3	NAC domain protein, IPR003441	-	-	-

Source	Gene names
Sma3	131L1.6; 134P10.2; AT4g10350; AT4g17980; AT4g35580; AT4g36160; At1g12260; At1g32510; At1g33060; At1g33280; At1g34190; At1g54330; At1g65910; At1g69490; At1g76420; At1g79580; At2g18060; At2g24430; At3g03200; At3g10480; At3g10500; At3g17730; At3g29035; At4g1

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	metallopeptidase activity	GO:0008237	Molecular Function	-
Sma3	transcription regulator activity	GO:0030528	Molecular Function	-
Sma3	protein homodimerization activity	GO:0042803	Molecular Function	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	response to cytokinin stimulus	GO:0009735	Biological Process	-
Sma3	response to abscisic acid stimulus	GO:0009737	Biological Process	-
Sma3	response to brassinosteroid stimulus	GO:0009741	Biological Process	-
Sma3	multidimensional cell growth	GO:0009825	Biological Process	-
Sma3	flower development	GO:0009908	Biological Process	-
Sma3	meristem initiation	GO:0010014	Biological Process	-
Sma3	primary shoot apical meristem specification	GO:0010072	Biological Process	-
Sma3	xylem development	GO:0010089	Biological Process	-
Sma3	leaf senescence	GO:0010150	Biological Process	-
Sma3	formation of organ boundary	GO:0010160	Biological Process	-
Sma3	organ boundary specification between lateral organs and the meristem	GO:0010199	Biological Process	-
Sma3	response to chitin	GO:0010200	Biological Process	-
Sma3	secondary shoot formation	GO:0010223	Biological Process	-
Sma3		GO:0045449	Biological Process	-
Sma3	leaf development	GO:0048366	Biological Process	-
Sma3	regulation of timing of organ formation	GO:0048504	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK	IPR000550	-	-
Sma3	Peptidase M20	IPR002933	-	-
Sma3	No apical meristem (NAM) protein	IPR003441	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Cytochrome c oxidase biogenesis protein Cmc1-like	IPR013892	-	-
Sma3	Glycoside hydrolase, family 9, active site	IPR018221	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G65910.1	anac028, NAC028 NAC domain containing protein 28 chr1:24520933-24524108 REVERSE LENGTH=631	73%
RefSeq	Arabidopsis thaliana	NP_176766.1	NAC domain containing protein 28 [Arabidopsis thaliana]	73%
RefSeq	Populus trichocarpa	XP_002305903.1	NAC domain protein, IPR003441 [Populus trichocarpa]	75%

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain