SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene144381

Length: 229 nt

UniGene Fasta

>sp_v3.0_unigene144381
CGTCGTGACCTTGGTTGTGACCTTGGTTGTCATCCATTGGGTGGTCTTTCGGCGTTTATTAAAGCCCTCGAGAAGGCTACCGATAGCGTTTTAATAGATCCAGAGAAAATGCCGTTGTTGAGCGCATGGATGGATCGATTCTTTAAATCCGATGGAGTGAAAGAAGTAATGCCCGATGTGGCCAAAGCAGGCGGAATTTATATCCACTAGGAGAGCCAGTATGATATCA

Ace file of the UniGene sp_v3.0_unigene144381

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Tau class glutathione S-transferase n=3 Tax=Pinus RepID=Q4PNY9_PINTB	-	-	1.0e-16	80%
FL-Next	tr=Tau class glutathione S-transferase; Pinus yunnanensis (Yunnan pine).	-	-	0.0	86%
Sma3	Tau class glutathione S-transferase	-	-	6.113e-09	-

Source	Gene names
Sma3	Sb18; Sb52;

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity	GO:0016740	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Glutathione S-transferase, N-terminal	IPR004045	-	-
Sma3	Glutathione S-transferase, C-terminal	IPR004046	-	-
Sma3	Glutathione S-transferase, C-terminal-like	IPR010987	-	-
Sma3		IPR012335	-	-
Sma3	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q4PNZ1

Fln msg: your sequence is shorter than subject: 70 - 237

Fln protein: RRDLGCDLGCHPLGGLSAFIKALEKATDSVLIDPEKMPLLSAWMDRFFKSDGVKEVMPDVAKAGGIYIH*

Protein Length: 71

Fln nts: CGTCGTGACCTTGGTTGTGACCTTGGTTGTCATCCATTGGGTGGTCTTTCGGCGTTTATTAAAGCCCTCGAGAAGGCTACCGATAGCGTTTTAATAGATCCAGAGAAAATGCCGTTGTTGAGCGCATGGATGGATCGATTCTTTAAATCCGATGGAGTGAAAGAAGTAATGCCCGATGTGGCCAAAGCAGGCGGAATTTATATCCACTAG___GAGAGCCAGTATGATATCA

Fln Alignment:

AllPine_a_rep_c114228___LGGLSAFIKALEKATDSVLIDPEKMPLLSAWMDRFFKSDGVKEVMPDVAK
Q4PNZ1________________LGGMSTFIKAVEKATDSVLIDPEKMPLLTAWMDRFCKSDGVKEVMPDPVK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain