SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene142407

Length: 927 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene142407

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CBL-interacting protein kinase 22 [Populus trichocarpa] gb\|ABK95707.1\| unknown [Populus trichocarpa]	-	-	0.0	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Sma3	CBL-interacting serine/threonine-protein kinase, putative	-	-	1.05504e-41	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	0.0	-
Sma3	Calcium/calmodulin-dependent protein kinase.	EC:2.7.11.17	-	1.167e-29	-

Source	Gene names
Sma3	ACRE216; ATPK10; At1g01140; At1g29230; At1g30270; At2g26980; At2g30360; At2g34180; At4g18700; At4g30960; At5g01810; At5g01820; At5g07070; At5g10930; At5g21326; At5g25110; At5g35410; At5g45810; At5g45820; At5g58380; B1131G08.36; CIPK; CIPK1; CIPK10; CIPK11

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type vacuole membrane	GO:0009705	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	potassium channel activity	GO:0005267	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	potassium ion binding	GO:0030955	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	signal transduction	GO:0007165	Biological Process	-
Sma3	response to nutrient	GO:0007584	Biological Process	-
Sma3	response to pH	GO:0009268	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	response to abiotic stimulus	GO:0009628	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	response to cytokinin stimulus	GO:0009735	Biological Process	-
Sma3	response to abscisic acid stimulus	GO:0009737	Biological Process	-
Sma3	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	-
Sma3	negative regulation of abscisic acid mediated signaling pathway	GO:0009788	Biological Process	-
Sma3	potassium ion import	GO:0010107	Biological Process	-
Sma3	stomatal movement	GO:0010118	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	NAF domain	IPR004041	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	Ribosomal protein S14, conserved site	IPR018271	-	-
Sma3	NAF/FISL domain	IPR018451	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G30960.1	CIPK6, SIP3, SNRK3.14, ATCIPK6 SOS3-interacting protein 3 chr4:15067400-15068725 FORWARD LENGTH=441	54%
RefSeq	Arabidopsis thaliana	NP_194825.1	CBL-interacting serine/threonine-protein kinase 6 [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002323059.1	predicted protein, partial [Populus trichocarpa]	56%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9K4

Fln msg: Separated hits, possible frame ERROR between 758 and 760, your sequence is shorter than subject: 299 - 431

Fln protein: RDLKPENLLLDDNGNVKVSDFGLSALPEHFRKDGLLHTACGTPAYVAPEVITKKGYDGAMADIWSCGVILFVLMAGYLPFQDANRIIMYKKIHKGDYKCPPWFSSEVRRLVHRLLDPNPRTRITVPQLMEVPWFRRDFKRPQTDRDVTVDLLDDVDSTFLVPKPACLNAFDIISLSPWFNLSGLFKDNAMKQEEESRFTSTQPASSIMSKLEEIASLFRFSFKKSKDFKMKLQGSEQGRKGHLSIDAEIFExxTSSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDGNSQEK*

Protein Length: 300

Fln nts: ACCGGGACTTGAAGCCGGAAAACTTGTTATTAGACGACAACGGGAATGTTAAGGTCTCCGATTTCGGGCTGAGCGCACTGCCGGAGCACTTTAGGAAGGACGGCCTTCTGCACACGGCGTGCGGCACGCCGGCCTATGTTGCACCCGAGGTTATCACCAAGAAGGGGTATGATGGTGCCATGGCAGACATTTGGTCATGCGGGGTCATACTGTTCGTGCTCATGGCGGGTTACTTGCCGTTCCAGGACGCGAATCGGATCATCATGTATAAGAAGATCCACAAGGGAGACTACAAGTGCCCGCCCTGGTTTTCCTCCGAAGTCCGCCGGCTCGTCCACCGGTTGCTAGACCCTAATCCCCGGACGAGGATCACCGTTCCGCAGCTAATGGAGGTCCCCTGGTTTCGCCGAGACTTCAAGCGCCCGCAGACCGATAGAGACGTCACTGTTGATCTCCTGGATGACGTTGACTCTACGTTTTTGGTGCCGAAGCCGGCCTGCCTGAACGCCTTCGACATAATCTCCCTCTCGCCATGGTTCAATCTCTCCGGGCTCTTCAAGGACAATGCCATGAAGCAGGAGGAGGAATCGCGGTTCACTTCGACTCAGCCGGCGTCGAGCATAATGTCGAAGCTGGAGGAGATTGCAAGCCTATTCCGGTTCAGCTTCAAGAAGTCCAAGGACTTCAAGATGAAGTTGCAGGGGTCGGAGCAGGGGCGGAAGGGGCACTTGTCTATTGATGCCGAGATTTTTGAGGTxxxCACTTCCTCGTTTTTCATGGTCGAGCTTCGGAAAACCGGCGGGGATACGCTGGAGTACAGTAAGTTCTGCAGCCAAGATCTGAGGCCCGGCCTCAAAGACATTGTGTGGACATGGGATGGCAATAGTCAGGAGAAATAATATCATCATCATGCTTGCTACAAATTTACC

Fln Alignment:

AllPine_a_rep_c107109___RDLKPENLLLDDNGNVKVSDFGLSALPEHFRKDGLLHTACGTPAYVAPEVITKKGYDGAMADIWSCGVILFVLMAGYLPFQDANRIIMYKKIHKGDYKCPPWFSSEVRRLVHRLLDPNPRTRITVPQLMEVPWFRRDFKRPQXXXXXXXXXXXXXXXXXXXPKPACLNAFDIISLSPWFNLSGLFKDNAMKQEEESRFTSTQPASSIMSKLEEIAXXXXXXXXXXXXXXXXLQGSEQGRKGHLSIDAEIFEVxTSSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDGNSQEK
D5A9K4________________RDLKPENLLLDDNGVVKVSDFGLSALPEQFRQDGLLHTACGTPAYVAPEVITKKGYDGATADIWSCGVILFVLMAGYLPFQDANLMVMYKKIYKGDYKCPPWFSSEVRRLVLRLLDPNPRTRITVPQLMEVPWFRRGFKRPQADKDVNVGVLDDVDSAFFVPKPACLNAFDIISLSPGFNLSGLFKDDVLKQEEESRFTSTQPASSIMSKLEEIASLFRFSFKKSKDFKMKLQGSEQGRKGHLSIDAEIFEVxTPSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDGNRQEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain