SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene142377

Length: 1091 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene142377

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY	-	-	0.0	98%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Sma3	Putative aconitase	-	-	2.571e-14	-

Source	ECs	Term	Type	e value	Identity
Sma3	Aconitate hydratase.	EC:4.2.1.3	-	1.436e-32	-

Source	KEGGs	Term	e value	Identity
Sma3	Citrate cycle (TCA cycle)	00020	1.436e-32	%
Sma3	Glyoxylate and dicarboxylate metabolism	00630	1.436e-32	%
Sma3	Carbon fixation pathways in prokaryotes	00720	1.436e-32	%
Sma3	Biosynthesis of phenylpropanoids	01061	1.436e-32	%
Sma3	Biosynthesis of terpenoids and steroids	01062	1.436e-32	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063	1.436e-32	%
Sma3	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	1.436e-32	%
Sma3	Biosynthesis of alkaloids derived from histidine and purine	01065	1.436e-32	%
Sma3	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	1.436e-32	%
Sma3	Biosynthesis of plant hormones	01070	1.436e-32	%
Sma3	Metabolic pathways	01100	1.436e-32	%
Sma3	Biosynthesis of secondary metabolites	01110	1.436e-32	%

Source	Gene names
Sma3	ACO; ACO1; ACO2; ACO3; At2g05710; At4g26970; At4g35830; B1435D02.25; F10M23.310; F4B14.100; GSVIVT00009806001; GSVIVT00012354001; GSVIVT00013720001; GSVIVT00026023001; GSVIVT00027318001; IRP1; LOC_Os03g04410; LOC_Os08g09200; MtrDRAFT_AC182813g19v2; Os03g0

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	aconitate hydratase activity	GO:0003994	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	4 iron, 4 sulfur cluster binding	GO:0051539	Molecular Function	-
Sma3	glyoxylate cycle	GO:0006097	Biological Process	-
Sma3	tricarboxylic acid cycle	GO:0006099	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	steroid metabolic process	GO:0008202	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Aconitase A/isopropylmalate dehydratase small subunit, swivel	IPR000573	-	-
Sma3	Oxysterol-binding protein	IPR000648	-	-
Sma3	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha	IPR001030	-	-
Sma3	Aconitase/iron regulatory protein 2	IPR006249	-	-
Sma3	Aconitase/3-isopropylmalate dehydratase, swivel	IPR015928	-	-
Sma3	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3	IPR015931	-	-
Sma3	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2	IPR015932	-	-
Sma3	Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase	IPR015934	-	-
Sma3	Aconitase/isopropylmalate dehydratase	IPR015937	-	-
Sma3	Aconitase family, 4Fe-4S cluster binding site	IPR018136	-	-
Sma3	PDZ-binding protein, CRIPT	IPR019367	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G05710.1	ACO3 aconitase 3 chr2:2141591-2146350 FORWARD LENGTH=990	87%
RefSeq	Arabidopsis thaliana	NP_178634.2	aconitate hydratase 2 [Arabidopsis thaliana]	87%
RefSeq	Populus trichocarpa	XP_002331755.1	predicted protein [Populus trichocarpa]	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX49

Fln msg: Separated hits, possible frame ERROR between 502 and 588, and possible frame ERROR between 686 and 838, Distance to subject end: 21 aas, your sequence is shorter than subject: 364 - 565

Fln protein: MSEEIAEVVQSAVLPDMFKQTYEAITKGNPMWNQLPVPTGTLYTWDPKSTYIHDPPYFKDMTMTPPGPHGVKDAYCLLNLGDSITTDHISPAGNIQKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVYDAAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRYKSAGHDTIVLAGAEYGSGSSRDWAAKGPMLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNQGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDAESLGLTGHERYTIDIPNDITQLKPGQDITVTTDTGKSFTCVARFDTQVI

Protein Length: 365

Fln nts: AATGTCTGAAGAAATAGCAGAGGTTGTACAATCTGCTGTCCTACCAGACATGTTTAAGCAAACATATGAAGCAATAACAAAGGGCAATCCTATGTGGAACCAGCTTCCTGTTCCAACCGGCACTTTGTATACGTGGGATCCAAAATCCACTTACATACATGATCCTCCATATTTTAAAGATATGACAATGACTCCTCCTGGTCCACATGGCGTGAAGGATGCATACTGTTTGCTTAACTTGGGGGACAGCATAACAACAGATCACATTTCTCCTGCAGGCAACATCCAGAAAGATAGTCCAGCAGCAAAGTATCTTATGGAACGTGGAGTTGATAGAAAAGACTTCAATTCCTATGGAAGTCGTCGAGGAAATGACGAAATCATGGCTAGAGGAACATTTGCAAATATCCGCTTGGTGAATAAGCTCTTGAATGGTGAAGTTGGGCCAAAAACCATACATATCCCCACTGGAGAGAAGTTATCTGTGTATGATGCAGCTATxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGGTACAAAAGTGCAGGGCATGATACAATTGTTCTTGCTGGAGCTGAATATGGTAGTGGAAGTTCTCGGGATTGGGCTGCAAAGGGTCCAATGTTGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAACCAGGGTGTGAAAGCTGTTATCTCAAAAAGTTTTGAGCGTATTCATCGCAGCAATTTGGTTGGCATGGGTATTATTCCATTGTGTTTCAAATCTGGTGAGGACGCTGAGTCGCTTGGCCTGACAGGGCATGAGAGATACACAATAGATATTCCTAATGATATCACTCAACTGAAGCCGGGTCAAGACATTACTGTTACAACAGACACTGGAAAATCATTCACTTGTGTTGCAAGGTTTGATACACAGGTAATATA

Fln Alignment:

AllPine_a_rep_c107004___SEEIAEVVQSAVLPDMFKQTYEAITKGNPMWNQLPVPTGTLYTWDPKSTYIHDPPYFKDMTMTPPGPHGVKDAYCLLNLGDSITTDHISPAGNIQKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVYDAAMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRYKSAGHDTIVLAGAEYGSGSSRDWAAKGPMLQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDAESLGLTGHERYTIDIPNDITQLKPGQDITVTTDTGKSFTCVARFDTQV
A9NX49________________TEEIAEVVHSAVLPDMFRQTYEAITKGNPMWNQLPVPTGTLYTWDPTSTYIHDPPYFKDMTMTPPGPHGVKDAYCLLNLGDSITTDHISPAGNIQKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVYDAAIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRYKSAGQDTIVLAGAEYGSGSSRDWAAKGPMLQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDAESLGLTGHERYSIDLPNDIAQLKPGQDITVTTDTGKSFTCVARFDTQV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain