SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene142104

Length: 327 nt

UniGene Fasta

>sp_v3.0_unigene142104
CGTCGTGACCTTGGCTGTCACTCAAGTTTGCTGGATAAGGGTATTACGAATATTGCTCTTTATGCTGAACCCCATGTGTTGGGGTTTTATCGGCCCCTGGGATTCACTGCAGATCCTGATGGAATCAAGGCTATGGTCTATTCTAAGACAATTTCAGGAAACCGATGAGGGAAAAACAAATTAGGTGTGTTTTAGTTCTGCATTTGAATTTGGTTTCGGTATGGATATGCTGAAACGCAGGCGATACACGTATCAAGAGGGATGATATGTGTATCTAGCACCATACATTAAGAGGCTATAAAAGAGGCTTTCCCTAGCATTCCTCTT

Ace file of the UniGene sp_v3.0_unigene142104

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	7.0e-06	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%

Source	Gene names
Sma3	At1g26220; At1g26220/F28B23_27; F28B23.27; PHYPADRAFT_72140; POPTRDRAFT_421506; RCOM_1465100; VITISV_037700;

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	N-acetyltransferase activity	GO:0008080	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	GNAT domain	IPR000182	-	0.0	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G26220.1	Acyl-CoA N-acyltransferases (NAT) superfamily protein chr1:9071157-9071750 FORWARD LENGTH=197	1.0e-13	80%
RefSeq	Arabidopsis thaliana	NP_173946.1	Acyl-CoA N-acyltransferase domain-containing protein [Arabidopsis thaliana]	2.0e-13	80%
RefSeq	Populus trichocarpa	XP_002312367.1	predicted protein, partial [Populus trichocarpa]	4.0e-17	73%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPF8

Fln msg: your sequence is shorter than subject: 56 - 248

Fln protein: RRDLGCHSSLLDKGITNIALYAEPHVLGFYRPLGFTADPDGIKAMVYSKTISGNR*

Protein Length: 57

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGTTTGCTGGATAAGGGTATTACGAATATTGCTCTTTATGCTGAACCCCATGTGTTGGGGTTTTATCGGCCCCTGGGATTCACTGCAGATCCTGATGGAATCAAGGCTATGGTCTATTCTAAGACAATTTCAGGAAACCGATGA___GGGAAAAACAAATTAGGTGTGTTTTAGTTCTGCATTTGAATTTGGTTTCGGTATGGATATGCTGAAACGCAGGCGATACACGTATCAAGAGGGATGATATGTGTATCTAGCACCATACATTAAGAGGCTATAAAAGAGGCTTTCCCTAGCATTCCTCTT

Fln Alignment:

AllPine_a_rep_c105806___SSLLDKGITNIALYAEPHVLGFYRPLGFTADPDGIKAMVYSKTISGNR
A9NPF8________________ASLLDKGITNIALYAEPHVLGFYRPLGFTADPDGIKAMVYSKTISGNR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain