SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene141664

Length: 119 nt

UniGene Fasta

>sp_v3.0_unigene141664
AGAAGACACTTCGCCGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAGTCGTTTGAGAAAAGCATATGTTCAACAGCTGGAAAGTAGTCGACTAAAGCTGACTCAGCTGGAGCAGGAGCT

Ace file of the UniGene sp_v3.0_unigene141664

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	BZIP transcription factor bZIP99 n=3 Tax=Phaseoleae RepID=Q0GPG6_SOYBN	-	-	4.0e-07	88%
FL-Next	sp=Transcription factor TGA6; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	100%
Sma3	BZIP transcription factor	-	-	1.987e-13	-

Source	Gene names
Sma3	At1g08320; At3g12250; At5g06839; At5g06960; AtbZIP21; AtbZIP65; BZIP26; BZIP45; GSVIVT00000647001; GSVIVT00015295001; GSVIVT00025350001; GSVIVT00030308001; GSVIVT00030891001; GSVIVT00037363001; MOJ9.13; OBF3.1; OBF3.2; OBF5; OJ1150_E04.124; OJ1165_F02.101

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	GTPase activator activity	GO:0005096	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	sequence-specific DNA binding	GO:0043565	Molecular Function	-
Sma3	protein dimerization activity	GO:0046983	Molecular Function	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	signal transduction	GO:0007165	Biological Process	-
Sma3	response to xenobiotic stimulus	GO:0009410	Biological Process	-
Sma3	defense response, incompatible interaction	GO:0009814	Biological Process	-
Sma3	salicylic acid mediated signaling pathway	GO:0009863	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	Basic-leucine zipper domain	IPR004827	-	-
Sma3	bZIP transcription factor, bZIP-1	IPR011616	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	DNA/RNA non-specific endonuclease, active site	IPR018524	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q39140

Fln msg: Overlapping hits, possible frame ERROR between 50 and 40, Distance to subject end: 244 aas, your sequence is shorter than subject: 39 - 330

Fln protein: KTLRRLAQNREAxxxxxLRKAYVQQLESSRLKLTQLEQE

Protein Length: 40

Fln nts: AGAAGACACTTCGCCGGCTTGCTCAGAATCGTGAGGCTxxxxxxxxxxxxxxxTTGAGAAAAGCATATGTTCAACAGCTGGAAAGTAGTCGACTAAAGCTGACTCAGCTGGAGCAGGAGCT

Fln Alignment:

AllPine_a_rep_c104658___KTLRRLAQNREAAxxxRLRK-AYVQQLESSRLKLTQLEQE
Q39140________________KTLRRLAQNREAAxxxRLRKKAYVQQLENSRLKLTQLEQE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain