SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene141022

Length: 178 nt

UniGene Fasta

>sp_v3.0_unigene141022
CGTCGTGACCTTGGCTGTCACTCTCTTGTCCTTGTCTGTGATCATCGAGTCTTTGATTATGACATTGGAGGTAAGCTTTTGGATGCCTTGTCCACAAACTTCATGGAAGCCAACAGACTTCTCGTATGAGATACCTTATGAGTTGCAGCCTGTTATCAAGCTACAATTCAGTTATATG

Ace file of the UniGene sp_v3.0_unigene141022

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	2.0e-07	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%

Source	InterPros	Term	Type	Identity
Sma3	Biotin/lipoyl attachment	IPR000089	-	-
Sma3	2-oxoacid dehydrogenase acyltransferase, catalytic domain	IPR001078	-	-
Sma3	2-oxo acid dehydrogenase, lipoyl-binding site	IPR003016	-	-
Sma3	E3 binding	IPR004167	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPX9

Fln msg: your sequence is shorter than subject: 43 - 529

Fln protein: RRDLGCHSLVLVCDHRVFDYDIGGKLLDALSTNFMEANRLLV*

Protein Length: 44

Fln nts: CGTCGTGACCTTGGCTGTCACTCTCTTGTCCTTGTCTGTGATCATCGAGTCTTTGATTATGACATTGGAGGTAAGCTTTTGGATGCCTTGTCCACAAACTTCATGGAAGCCAACAGACTTCTCGTATGA___GATACCTTATGAGTTGCAGCCTGTTATCAAGCTACAATTCAGTTATATG

Fln Alignment:

AllPine_a_rep_c102883___SLVLVCDHRVFDYDIGGKLLDALSTNFMEANRLLV
B8LPX9________________NLSLSADHRVFDYDIGGKFLDALSTNFMEAKRLIL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain