SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene140720

Length: 616 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene140720 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative PQ-loop repeat family protein [Prunus dulcis]	-	-	5.0e-31	60%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	60%

Source	Gene names
Sma3	AT4G36850; AT4g20100; AT4g36850; At2g41050; At4g20100; At4g36850; C7A10.510; GSVIVT00025009001; MtrDRAFT_AC149134g33v2; Os01g0266800; OsI_01310; OsJ_01221; P0011D01.8; POPTRDRAFT_867186; POPTRDRAFT_906883; RCOM_0411610;

Source	InterPros	Term	Type	e value	Identity
Sma3	Cystinosin/ERS1p repeat	IPR006603	-	0.0	-
Sma3	Somatotropin hormone, conserved site	IPR018116	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G36850.1	PQ-loop repeat family protein / transmembrane family protein chr4:17353415-17355822 REVERSE LENGTH=392	9.0e-38	68%
RefSeq	Arabidopsis thaliana	NP_568009.5	PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]	1.0e-37	68%
RefSeq	Populus trichocarpa	XP_002322574.1	predicted protein [Populus trichocarpa]	2.0e-36	58%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
458			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain