SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene133185

Length: 400 nt

UniGene Fasta

>sp_v3.0_unigene133185
ATGGGGGAAAGACAAGGTGTGTTCCCTCAAACTCAATGGCTCTGTCACCAGCATGGCTACTTAAGACTAAAAGACCAAGCCCAATGTTGAACAGCGCATCTTTTTCATTAATTTGGTTATGAGTTCGCCATCCTGTATACTATAACCCGGCAATGATGTTTGTCACTCAGTGGTGAGGAAACGGAGAACAATGGCAGGAGCAGGAGAAGGAACTCCCGAGGGCACCCTCGAGACCTCCATGGGTCCTATCACAGTGGAGCTCTACCACAAGCACGCCCCCAAGACCTGCAGGAATTTCTTGGAGCTCTCAAGAAGGGGCTATTACAACAATGTCAAATTCCACCGCGTTATCAAGGATTTCATGGTGCAAGGCGGAGACCCAACTGGAACAGGAAGAGGC

Ace file of the UniGene sp_v3.0_unigene133185

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NNI6_PICSI	-	-	6.0e-33	94%
FL-Next	sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Sma3	Peptidyl-prolyl cis-trans isomerase	-	-	1.559e-34	-

Source	ECs	Term	Type	e value	Identity
Sma3	Peptidylprolyl isomerase.	EC:5.2.1.8	-	1.271e-38	-

Source	Gene names
Sma3	AT4g33060; At2g36130; At4g33060; CHLREDRAFT_132902; CHLREDRAFT_196565; CYN18-2; CYN65; CYP18-2; CYP57; CYP59; GSVIVT00021565001; MICPUCDRAFT_31157; MICPUCDRAFT_70676; MICPUCDRAFT_7681; MICPUN_55025; MICPUN_66893; MICPUN_72034; MICPUN_86534; MICPUN_99137;

Source	GOs	Term	Type	e value	Identity
Sma3	peptidyl-prolyl cis-trans isomerase activity	GO:0003755	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain	IPR002130	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G36130.1	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein chr2:15166863-15168259 FORWARD LENGTH=164	4.0e-34	76%
RefSeq	Arabidopsis thaliana	NP_181157.1	peptidyl-prolyl cis-trans isomerase-like 1 [Arabidopsis thaliana]	5.0e-34	76%
RefSeq	Populus trichocarpa	XP_002322812.1	predicted protein [Populus trichocarpa]	7.0e-37	84%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NNI6

Fln msg: Distance to subject end: 93 aas, your sequence is shorter than subject: 70 - 163

Fln protein: MAGAGEGTPEGTLETSMGPITVELYHKHAPKTCRNFLELSRRGYYNNVKFHRVIKDFMVQGGDPTGTGRG

Protein Length: 71

Fln nts: ATGGGGGAAAGACAAGGTGTGTTCCCTCAAACTCAATGGCTCTGTCACCAGCATGGCTACTTAAGACTAAAAGACCAAGCCCAATGTTGAACAGCGCATCTTTTTCATTAATTTGGTTATGAGTTCGCCATCCTGTATACTATAACCCGGCAATGATGTTTGTCACTCAGTGGTGAGGAAACGGAGAACA_-_ATGGCAGGAGCAGGAGAAGGAACTCCCGAGGGCACCCTCGAGACCTCCATGGGTCCTATCACAGTGGAGCTCTACCACAAGCACGCCCCCAAGACCTGCAGGAATTTCTTGGAGCTCTCAAGAAGGGGCTATTACAACAATGTCAAATTCCACCGCGTTATCAAGGATTTCATGGTGCAAGGCGGAGACCCAACTGGAACAGGAAGAGGC

Fln Alignment:

AllPine_a_c88282___MAGAGEGTPEGTLETSMGPITVELYHKHAPKTCRNFLELSRRGYYNNVKFHRVIKDFMVQGGDPTGTGRG
A9NNI6________________MAGAGEGPPEVTLETSMGPVAVELYHKHAPKTCRNFLELSRRGYYNNVKFHRVIKDFMVQGGDPTGTGRG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain