SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene132423

Length: 400 nt

UniGene Fasta

>sp_v3.0_unigene132423
CGTCGTGACCTTGGCTGTCACTCATGGATTTTTACGGTTGGAGCGGCCTCAATCGACCGGGAATTCCTCTCCAACGTTGTGTTAGGCAACGGTAAGATTATTCAGGGTAAGGGCATCACCTTTTCGAATCTCAGCCAATCGGCCGTGCACCCGCTTGTGTACGCAGGAAGCATTCCTGACAACTCCAGTTACCCAGCAGCTGCAAGAAATTGTCTTCTAGAATCCTTAGACGCAAGCAAAGCGAAAGGAAAGGTTATACTCTGTATTGCAAATGCCACAGCTACATCGAAGGGAATTATGAAATACACAGTCCAGGACGCTGGAGGCATAGGCATGATTTTTGTGGACGATTTACAGATATTTGAAGCATATGACTCCGGCACCTTTGCAGCGACTACAG

Ace file of the UniGene sp_v3.0_unigene132423

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB	-	-	0.0	80%
FL-Next	tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	80%

Source	Gene names
Sma3	af70;

Source	GOs	Term	Type	Identity
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	negative regulation of catalytic activity	GO:0043086	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002300693.1	predicted protein [Populus trichocarpa]	9.0e-26	46%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q40764

Fln msg: Distance to subject end: 314 aas, your sequence is shorter than subject: 133 - 779

Fln protein: RRDLGCHSWIFTVGAASIDREFLSNVVLGNGKIIQGKGITFSNLSQSAVHPLVYAGSIPDNSSYPAAARNCLLESLDASKAKGKVILCIANATATSKGIMKYTVQDAGGIGMIFVDDLQIFEAYDSGTFAATT

Protein Length: 134

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGGATTTTTACGGTTGGAGCGGCCTCAATCGACCGGGAATTCCTCTCCAACGTTGTGTTAGGCAACGGTAAGATTATTCAGGGTAAGGGCATCACCTTTTCGAATCTCAGCCAATCGGCCGTGCACCCGCTTGTGTACGCAGGAAGCATTCCTGACAACTCCAGTTACCCAGCAGCTGCAAGAAATTGTCTTCTAGAATCCTTAGACGCAAGCAAAGCGAAAGGAAAGGTTATACTCTGTATTGCAAATGCCACAGCTACATCGAAGGGAATTATGAAATACACAGTCCAGGACGCTGGAGGCATAGGCATGATTTTTGTGGACGATTTACAGATATTTGAAGCATATGACTCCGGCACCTTTGCAGCGACTACAG

Fln Alignment:

AllPine_a_rep_c86776___WIFTVGAASIDREFLSNVVLGNGKIIQGKGITFSNLSQSAVHPLVYAGSIPDNSSYPAAARNCLLESLDASKAKGKVILCIANATATSKGIMKYTVQDAGGIGMIFVDDLQIFEAYDSGTFAAT
Q40764________________WIFTVGATSIDREFLSNVVLGNGKIIKGKGITMSNLSHSAVHPLVYAGSIPDKSSYPVAASNCLLDSLDASKAKGNVVVCIANDTAASRYIMKLAVQDAGGIGMVVVEDIQIFEAFDYGTFPAT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain