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UniGene Name: sp_v3.0_unigene131755
Length: 187 nt
 UniGene Fasta
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| >sp_v3.0_unigene131755
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Ace file of the UniGene sp_v3.0_unigene131755
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI | - | - | 4.0e-15 | 67% |
| FL-Next | sp=DNA-directed RNA polymerase 1B, mitochondrial; Nicotiana tabacum (Common tobacco). | - | - | 0.0 | 75% |
| Sma3 | DNA-directed RNA polymerase | - | - | 6.566e-26 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | DNA-directed RNA polymerase. | EC:2.7.7.6 | - | 5.259e-32 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Purine metabolism | 00230 | 5.259e-32 | % | |
| Sma3 | Pyrimidine metabolism | 00240 | 5.259e-32 | % | |
| Sma3 | Metabolic pathways | 01100 | 5.259e-32 | % |
| Source | Gene names |
|---|---|
| Sma3 | At1g68990; At2g24120; At5g15700; BoB028L01.020; F14F8_80; GSVIVT00013890001; GSVIVT00017168001; GSVIVT00021161001; GSVIVT00038106001; NEP; OJ1058_F03.15-1; OSJNBa0069P02.30-1; Os06g0652000; Os09g0246200; OsI_23934; OsI_30516; OsJ_22187; OsJ_28503; P0453H0 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
| Sma3 | plastid | GO:0009536 | Cellular Component | 0.0 | - |
| Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
| Sma3 | DNA-directed RNA polymerase activity | GO:0003899 | Molecular Function | 0.0 | - |
| Sma3 | monooxygenase activity | GO:0004497 | Molecular Function | 0.0 | - |
| Sma3 | iron ion binding | GO:0005506 | Molecular Function | 0.0 | - |
| Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
| Sma3 | heme binding | GO:0020037 | Molecular Function | 0.0 | - |
| Sma3 | GO:0006350 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Cytochrome P450 | IPR001128 | - | 0.0 | - |
| Sma3 | DNA-directed RNA polymerase, phage-type | IPR002092 | - | 0.0 | - |
| Sma3 | Cytochrome P450, E-class, group I | IPR002401 | - | 0.0 | - |
| Sma3 | Sugar transporter, conserved site | IPR005829 | - | 0.0 | - |
| Sma3 | Cytochrome P450, conserved site | IPR017972 | - | 0.0 | - |
| Sma3 | IPR017973 | - | 0.0 | - | |
| Sma3 | EF-Hand 1, calcium-binding site | IPR018247 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G15700.2 | - | 2.0e-17 | 73% |
| RefSeq | Arabidopsis thaliana | NP_197074.1 | DNA-directed RNA polymerase 2 [Arabidopsis thaliana] | 2.0e-17 | 73% |
| RefSeq | Populus trichocarpa | XP_002315996.1 | predicted protein [Populus trichocarpa] | 8.0e-19 | 75% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q8L6J5
Fln msg: Distance to subject end: 430 aas, your sequence is shorter than subject: 62 - 1002
Fln protein:
W
Protein Length:
63
Fln nts:
A
Fln Alignment:
AllPine_a_rep_c85369___ADLVDREDVSIPEKPDTEDEAEIXXXXXXXXXXXXTNSEMHAQRCDVELKLAVARKMKDEE
Q8L6J5________________ADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDED
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
