SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene127512

Length: 125 nt

UniGene Fasta

>sp_v3.0_unigene127512
TGATAGCGTCCGACGCAGGAGACAATGTGAAGTTTGGTTTCCCAATGGCTTTCACGACCACCATGTTGTCATGGAAGCGTTTTGGAGTTCGGAAAGGGCGCATGGGGGATAACACCTCGACCATG

Ace file of the UniGene sp_v3.0_unigene127512

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cellulase CEL1-like	-	-	5.0e-05	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%

Source	Gene names
Sma3	PrCel2;

Source	GOs	Term	Type	e value	Identity
Sma3	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	0.0	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 9	IPR001701	-	-
Sma3	Six-hairpin glycosidase	IPR012341	-	-
Sma3	Glycoside hydrolase, family 9, active site	IPR018221	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUH0

Fln msg: Distance to subject end: 377 aas, your sequence is shorter than subject: 41 - 514

Fln protein: IASDAGDNVKFGFPMAFTTTMLSWKRFGVRKGRMGDNTSTM

Protein Length: 42

Fln nts: TGATAGCGTCCGACGCAGGAGACAATGTGAAGTTTGGTTTCCCAATGGCTTTCACGACCACCATGTTGTCATGGAAGCGTTTTGGAGTTCGGAAAGGGCGCATGGGGGATAACACCTCGACCATG

Fln Alignment:

AllPine_a_rep_c71814___DAGDNVKFGFPMAFTTTMLSWK--RFGVRKGRMGDN
A9NUH0________________DAGDNVKFGFPMAFTTTMLSWSVLEFG---GRMGDN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain