SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene127470

Length: 1022 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene127470

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Adenosine kinase n=1 Tax=Gossypium hirsutum RepID=D2D2Z6_GOSHI	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	e value	Identity
Sma3	adenosine kinase activity	GO:0004001	Molecular Function	0.0	-
Sma3	purine ribonucleoside salvage	GO:0006166	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Adenosine kinase	IPR001805	-	-
Sma3	Carbohydrate/purine kinase	IPR011611	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G03300.1	ADK2 adenosine kinase 2 chr5:796573-798997 FORWARD LENGTH=345	73%
RefSeq	Arabidopsis thaliana	NP_195950.1	adenosine kinase 2 [Arabidopsis thaliana]	73%
RefSeq	Populus trichocarpa	XP_002315310.1	predicted protein [Populus trichocarpa]	76%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P0M6

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 52 aas, your sequence is shorter than subject: 284 - 341

Fln protein: MAKEGVLFGMGNPLLDISAVVDEEFLKKYDVKLNNAILAEPHHVPMYQELADKENVEYIAGGATQNSIKVAQWILQVPGATSYIGCIGKDKFGAEMKKNSKAAGVNVHYYEDETKPTGTCGVLVVGGERSLVANLSAANCYKSEHLKSPENWALVEKAKFFYIAGFFLTVSPELHVQPQVESTQVRL*GKIFMMNLAAPFICEFFTEALMKVFPYMDYVFGNETEARTFAKAQGWETDNVEEIALKMSALPKATGTHKRIAVITQGADPVVIAEDGKVTVPVI*

Protein Length: 285

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGTTTTTGTTATAAGTAGTGATGCTAGGGGAGTAGATGCGGGACGTCAAATTCTTCATAGCAGGCAGGCGTCTCGCGATCGATTCTTAAAAGAAACATAGAAGTCGATTCTACCAAGAGGCAGGAA_-_ATGGCTAAGGAAGGTGTGCTCTTCGGCATGGGCAACCCCCTGTTGGACATCTCTGCTGTTGTTGACGAGGAGTTTTTGAAAAAATATGATGTGAAGCTCAACAACGCGATATTGGCAGAGCCACATCACGTTCCAATGTATCAAGAGCTTGCTGATAAAGAAAATGTTGAGTACATCGCAGGAGGGGCCACACAGAACTCTATCAAGGTTGCACAGTGGATCCTCCAAGTTCCTGGTGCAACAAGCTACATTGGGTGCATTGGCAAGGACAAGTTTGGGGCAGAGATGAAGAAAAATTCAAAAGCCGCTGGAGTCAATGTGCATTATTATGAGGATGAAACAAAACCAACTGGTACATGTGGTGTTCTTGTCGTTGGGGGTGAAAGGTCACTGGTTGCAAATTTGTCAGCAGCAAATTGCTACAAATCAGAACACTTGAAATCACCGGAAAACTGGGCTTTAGTTGAGAAGGCCAAGTTCTTTTATATTGCTGGCTTTTTCCTTACAGTCTCACCTGAGCTGCATGTTCAGCCACAAGTTGAATCGACTCAGGTGAGACTGTAAGGAAAGATATTTATGATGAATCTTGCAGCTCCCTTTATCTGTGAATTTTTTACCGAGGCATTGATGAAAGTTTTTCCGTATATGGATTATGTTTTTGGAAATGAGACTGAAGCAAGGACTTTTGCAAAGGCGCAAGGGTGGGAGACTGACAATGTTGAAGAAATAGCCCTAAAGATGTCAGCACTGCCAAAGGCAACTGGAACTCACAAGAGGATAGCTGTTATTACACAAGGTGCAGATCCAGTAGTCATTGCAGAAGATGGAAAGGTTACTGTTCCAGTGATTTGATTCCGAAGGATATTGTTGAT

Fln Alignment:

AllPine_a_rep_c71491___MAKEGVLFGMGNPLLDISAVVDEEFLKKYDVKLNNAILAEPHHVPMYQELADKENVEYIAGGATQNSIKVAQWILQVPGATSYIGCIGKDKFGAEMKKNSKAAGVNVHYYEDETKPTGTCGVLVVGGERSLVANLSAANCYKSEHLKSPENWALVEKAKFFYIAGFFLTVSPELHVQPQVESTQVRL*GKIFMMNLAAPFICEFFTEALMKVFPYMDYVFGNETEARTFAKAQGWETDNVEEIALKMSALPKATGTHKRIAVITQGADPVVIAEDGKVTV-PVI
A9P0M6________________MAKEGVLYGMGNPLLDISAVVDEEFLKKYDVKLNNAILAEPQHVPMYQELADRENVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGAEMKKNSKASGVNVHYYEDETKPTGTCGVLVVGGERSLVANLSAANCYKSEHLKSPENWALVEKARFFYIAGFFLTVSPESILLVAEHAAQK---GKIFMMNLAAPFICEFFTEALMKVFPYMDYVFGNETEARTFARVQGWETDNVEEIALKMSALPKATGTHKRIAVITQGADPTVIAEDGKVTLFPVI

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
202		11		88	0.991528
422	85		14		0.993533
535	75		25		0.996473
623	25	75			0.996473
785	83	16			0.994519
789			20	80	0.995493
791			20	80	0.995493
792	20			80	0.995493
795			83	16	0.994517
797	80		20		0.995493
798			20	80	0.995493
799	80	20			0.995493
803		25	75		0.996473
808	25			75	0.996473
853		75		25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain