SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene126694

Length: 469 nt

UniGene Fasta

>sp_v3.0_unigene126694
ATGCTTGGACGTGTTTCCCAGTCAAGTTTCCATATGTTTAGACCTCAATACTACTGCTTTTGTCAAGAGGATGATTAAAGCAGAGCAGCCAGATCTTATTGTTTTCACAGGTATTGATTTTAAATTTTGAATTTATAGCATAGCTCCAGAAGCCCTTGTACTGGAAGAGTTTGCACTCTATTTAGAGTCCAGCTGATAGGATTTTACCGTTCACCTCCTTTTTGGTGGAGGGTATTGATTGGGAAAGTTCATTAGGTCACACAACCACGGAGACACTTAAATCCCAAGCATTGCAGCTGTAATCAAAATCATGTTACAGGAAATTGTTTGCTTGAATGCATACTCTTAACTTGTTTTAGAATCAAAATGATATCATTTGTTTTCATTTTGAGTTTATAGCATAGCTCCAGAAGCCCTTGTACTGGAAGAGTTTGAACTCTATTTAGAGTCCAACTGATAGGATTACATT

Ace file of the UniGene sp_v3.0_unigene126694

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phosphatase DCR2, putative n=1 Tax=Ricinus communis RepID=B9RMZ0_RICCO	-	-	6.0e-09	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%

Source	Gene names
Sma3	POPTRDRAFT_245256; POPTRDRAFT_644690; POPTRDRAFT_644693; POPTRDRAFT_672103; RCOM_1341610;

Source	GOs	Term	Type	e value	Identity
Sma3	hydrolase activity	GO:0016787	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Phosphoesterase At2g46880	IPR011230	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002334406.1	predicted protein [Populus trichocarpa]	4.0e-12	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NXQ3

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 166 aas, your sequence is shorter than subject: 43 - 389

Fln protein: CLDVFPSQVSICLDLNTTAFVKRMIKAEQPDLIVFTGIDFKF*

Protein Length: 44

Fln nts: ATGCTTGGACGTGTTTCCCAGTCAAGTTTCCATATGTTTAGACCTCAATACTACTGCTTTTGTCAAGAGGATGATTAAAGCAGAGCAGCCAGATCTTATTGTTTTCACAGGTATTGATTTTAAATTTTGAATTTATAGCATAGCTCCAGAAGCCCTTGTACTGGAAGAGTTTGCACTCTATTTAGAGTCCAGCTGATAGGATTTTACCGTTCACCTCCTTTTTGGTGGAGGGTATTGATTGGGAAAGTTCATTAGGTCACACAACCACGGAGACACTTAAATCCCAAGCATTGCAGCTGTAATCAAAATCATGTTACAGGAAATTGTTTGCTTGAATGCATACTCTTAACTTGTTTTAGAATCAAAATGATATCATTTGTTTTCATTTTGAGTTTATAGCATAGCTCCAGAAGCCCTTGTACTGGAAGAGTTTGAACTCTATTTAGAGTCCAACTGATAGGATTACATT

Fln Alignment:

AllPine_a_rep_c65154___CLDVFPSQVSICLDLNTTAFVKRMIKAEQPDLIVFTG
A9NXQ3________________CEDVLPSQFSTCSDLNTTDFVKRMIKAEKPDFIVFTG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain