SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene124644

Length: 107 nt

UniGene Fasta

>sp_v3.0_unigene124644
AGGTAATGGTGGATATGGTCAAGTTTATGTCGGGCGCAGATTATGTGGAAGCACAGATCGCACAGGAGCGAATGCTTTGGAGGTTGCTTTAAAGTTTGAGCATCGCA

Ace file of the UniGene sp_v3.0_unigene124644

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein kinase [Medicago truncatula]	-	-	2.0e-07	71%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	0.0	80%
Sma3	Putative casein kinase	-	-	3.44e-07	-

Source	Gene names
Sma3	At3g03940; At5g18190; GSVIVT00016758001; GSVIVT00025476001; GSVIVT00032089001; LOC_Os03g57940; MtrDRAFT_AC167711g45v2; OSJNBa0017O06.16; OSJNBb0060J21.12; Os01g0772600; Os03g0793500; Os05g0200500; Os07g0171300; OsI_03913; OsI_13865; OsI_18806; OsI_25061;

Source	GOs	Term	Type	Identity
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	RNA-directed DNA polymerase activity	GO:0003964	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	RNA-dependent DNA replication	GO:0006278	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR015706	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G18190.1	Protein kinase family protein chr5:6010215-6013724 REVERSE LENGTH=691	1.0e-11	71%
RefSeq	Arabidopsis thaliana	NP_197320.1	protein kinase-like protein [Arabidopsis thaliana]	2.0e-11	71%
RefSeq	Populus trichocarpa	XP_002325416.1	predicted protein [Populus trichocarpa]	3.0e-12	74%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B8AA58

Fln msg: Distance to subject end: 519 aas, your sequence is shorter than subject: 35 - 647

Fln protein: GNGGYGQVYVGRRLCGSTDRTGANALEVALKFEHR

Protein Length: 36

Fln nts: AGGTAATGGTGGATATGGTCAAGTTTATGTCGGGCGCAGATTATGTGGAAGCACAGATCGCACAGGAGCGAATGCTTTGGAGGTTGCTTTAAAGTTTGAGCATCGCA

Fln Alignment:

AllPine_a_c61392___GNGGYGQVYVGRRLCGSTDRTGANALEVALKFEHR
B8AA58________________GKGGFGQVYVGRRVSGGTDRTGADAIEVALKFEHR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain