SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene124019

Length: 128 nt

UniGene Fasta

>sp_v3.0_unigene124019
AGCAAATGCATGATTGACCAACCCATGCTTTGCTGCTAGCACTGAGAGCTATTTTACAAGACTACCATGCAATGGTGGCACAGCTAGAACATCAATTTAGGTTAGGAAGATTGTCCCTGCAAGGACTG

Ace file of the UniGene sp_v3.0_unigene124019

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Spc97_Spc98 domain containing protein	-	-	2.0e-05	47%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	77%

Source	Gene names
Sma3	At5g17410; GSVIVT00020711001; H0311C03.7; OSJNBa0029H02.26; Os04g0501700; OsI_16525; OsJ_15355; PHYPADRAFT_135699; PHYPADRAFT_145069; PHYPADRAFT_194045; POPTRDRAFT_833741; RCOM_1158460; T10B6_70; TUBGCP4;

Source	GOs	Term	Type	Identity
Sma3	spindle pole	GO:0000922	Cellular Component	-
Sma3	microtubule organizing center	GO:0005815	Cellular Component	-
Sma3	microtubule cytoskeleton organization	GO:0000226	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Spc97/Spc98	IPR007259	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G17410.2	-	2.0e-11	80%
RefSeq	Arabidopsis thaliana	NP_568346.1	Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana]	2.0e-11	80%
RefSeq	Populus trichocarpa	XP_002316177.1	tubulin gamma complex-associated protein [Populus trichocarpa]	5.0e-11	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9TDT5

Fln msg: Distance to subject end: 540 aas, your sequence is shorter than subject: 42 - 642

Fln protein: QMHD*PTHALLLALRAILQDYHAMVAQLEHQFRLGRLSLQGL

Protein Length: 43

Fln nts: AGCAAATGCATGATTGACCAACCCATGCTTTGCTGCTAGCACTGAGAGCTATTTTACAAGACTACCATGCAATGGTGGCACAGCTAGAACATCAATTTAGGTTAGGAAGATTGTCCCTGCAAGGACTG

Fln Alignment:

AllPine_a_c60525___HD*PTHALLLALRAILQDYHAMVAQLEHQFRLGRLSLQGL
A9TDT5________________HGLVNHAFASALRAILQDYHAMTAQLEHQYRLGRLSLQGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain