SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene124009

Length: 109 nt

UniGene Fasta

>sp_v3.0_unigene124009
CTGAAAGAAATCTGTGCGGATGAAGATGGAGATCTTCTAATAGACTCAGCTGTGAGGAACATACCTAAGGTTTTTGTGTTTCATCGCTTGTAAATGTAATGCCAGCTCG

Ace file of the UniGene sp_v3.0_unigene124009

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Contains similarity to gb\|U51898 Ca2+-independent phospholipase A2 from Rattus norvegicus [Arabidopsis thaliana]	-	-	2.0e-05	76%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	83%

Source	Gene names
Sma3	POPTRDRAFT_789257; RCOM_0905300;

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Patatin/Phospholipase A2-related	IPR002641	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RXP1

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 643 aas, your sequence is shorter than subject: 31 - 1318

Fln protein: LKEICADEDGDLLIDSAVRNIPKVFVFHRL*

Protein Length: 32

Fln nts: CTGAAAGAAATCTGTGCGGATGAAGATGGAGATCTTCTAATAGACTCAGCTGTGAGGAACATACCTAAGGTTTTTGTGTTTCATCGCTTGTAAATGTAATGCCAGCTCG

Fln Alignment:

AllPine_a_c60514___LKEICADEDGDLLIDSAVRNIPKVFVFHRL
B9RXP1________________LKEMCADEDGDLLIDSAVKNIPKVFVVSTL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain