SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene123680

Length: 194 nt

UniGene Fasta

>sp_v3.0_unigene123680
AATGTAACCTGGAACTTGTCAATAGGGGACTTGCATCCCCTAGAAGAGTTTGACGTGGGTGATATAGTTTGGGCCAGATCTGACAAGAAAAATGACCCTGCTTGGCCTGCCAAAGTTATTGATCCTGTGCATGATGCGCCAGACTCAGTGCTAAGTGTTTATGTTCCTGGGCGCCTTTGTGTGATGTATTTCGG

Ace file of the UniGene sp_v3.0_unigene123680

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp\|Q9M364.2\|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3	-	-	3.0e-10	62%
FL-Next	sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	62%

Source	Gene names
Sma3	GSVIVT00037113001; Os01g0218900; OsI_00918; OsJ_00898; P0489G09.15;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	methyltransferase activity	GO:0008168	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	PWWP	IPR000313	-	-
Sma3	SET domain	IPR001214	-	-
Sma3	Zinc finger, PHD-type	IPR001965	-	-
Sma3	Post-SET domain	IPR003616	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G61740.1	SDG14, ATX3 SET domain protein 14 chr3:22851133-22856548 REVERSE LENGTH=1018	3.0e-14	62%
RefSeq	Arabidopsis thaliana	NP_001078326.1	histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana]	3.0e-14	62%
RefSeq	Populus trichocarpa	XP_002302629.1	hypothetical protein POPTRDRAFT_755392 [Populus trichocarpa]	9.0e-14	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9M364

Fln msg: Distance to subject end: 784 aas, your sequence is shorter than subject: 64 - 1018

Fln protein: NVTWNLSIGDLHPLEEFDVGDIVWARSDKKNDPAWPAKVIDPVHDAPDSVLSVYVPGRLCVMYF

Protein Length: 65

Fln nts: AATGTAACCTGGAACTTGTCAATAGGGGACTTGCATCCCCTAGAAGAGTTTGACGTGGGTGATATAGTTTGGGCCAGATCTGACAAGAAAAATGACCCTGCTTGGCCTGCCAAAGTTATTGATCCTGTGCATGATGCGCCAGACTCAGTGCTAAGTGTTTATGTTCCTGGGCGCCTTTGTGTGATGTATTTCGG

Fln Alignment:

AllPine_a_c60116___EEFDVGDIVWARSDKKNDPAWPAKVIDPVHDAPDSVLSVYVPGRLCVMYF
Q9M364________________EEFTVGDLVWAKCGKRF-PAWPAVVIDPISQAPDGVLKHCVPGAICVMFF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain