SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene123555

Length: 152 nt

UniGene Fasta

>sp_v3.0_unigene123555
TGGGATGGGAAGTATCTTCAATTGTTTTATCGACTCTGTTCAGACTCAACCAAGTATGCATTGCCTGTAAGACAGGAAGTATTTCAAAAGGTGGAAAGGCAGTACATGTTGGGCCTGAGAGCAAAGGATCCTGAGATGCGACAAAAGTTCTT

Ace file of the UniGene sp_v3.0_unigene123555

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	78%

Source	Gene names
Sma3	At2g17930; GSVIVT00036786001; OsI_27084; OsJ_25347; PHYPADRAFT_183414; POPTRDRAFT_757154; POPTRDRAFT_827059; RCOM_0870970;

Source	GOs	Term	Type	e value	Identity
Sma3	binding	GO:0005488	Molecular Function	0.0	-
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	PIK-related kinase, FAT	IPR003151	-	-
Sma3	PIK-related kinase, FATC	IPR003152	-	-
Sma3	PIK-related kinase	IPR014009	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G36080.1	" phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases chr4:17059996-17077628 REVERSE LENGTH=3834"	1.0e-16	68%
RefSeq	Arabidopsis thaliana	NP_001190933.1	transformation/transcription domain-associated protein [Arabidopsis thaliana]	1.0e-16	68%
RefSeq	Populus trichocarpa	XP_002327756.1	predicted protein [Populus trichocarpa]	6.0e-18	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9SCG8

Fln msg: Distance to subject end: 1401 aas, your sequence is shorter than subject: 50 - 3825

Fln protein: WDGKYLQLFYRLCSDSTKYALPVRQEVFQKVERQYMLGLRAKDPEMRQKF

Protein Length: 51

Fln nts: TGGGATGGGAAGTATCTTCAATTGTTTTATCGACTCTGTTCAGACTCAACCAAGTATGCATTGCCTGTAAGACAGGAAGTATTTCAAAAGGTGGAAAGGCAGTACATGTTGGGCCTGAGAGCAAAGGATCCTGAGATGCGACAAAAGTTCTT

Fln Alignment:

AllPine_a_c59968___WDGKYLQLFYRLCSDSTKYALPVRQEVFQKVERQYMLGLRAKDPEMRQKF
A9SCG8________________WDRMYLKLLHRLCSDTTKYNLSVRQEVFQKVERQFMLGLRSRDPEMRQKF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain